Comparative Genomics
For full details of The protein tree pipeline and the subsequent prediction of homologues, see the Ensembl Compara documentation.
This page provides a summary of the Ensembl phylogenetic analysis of protein families. The following views are available:- Overview
- Gene tree coverage and Gene QC for each species
- Size of gene trees (split by their root taxon)
- Gene tree nodes, and the inference of speciation / duplication events
Size of the trees (per root node)
| Species | # Trees | % Trees | # Genes | % Genes | Min # genes | Max # genes | Average # genes | Min # species | Max # species | Average # species | Average # genes per species |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Opisthokonta | 3772 | 1238237 | 2 | 8899 | 328.3 | 2 | 201 | 122.6 | 1.5 | ||
| Ascomycete fungi (Ascomycota) | 272 | 797 | 2 | 24 | 2.9 | 2 | 2 | 2.0 | 1.4 | ||
| Schizosaccharomyces pombe (Schizosaccharomyces pombe 972h-) | 70 | 216 | 2 | 18 | 3.1 | 1 | 1 | 1.0 | 3.1 | ||
| Saccharomyces cerevisiae (Saccharomyces cerevisiae S288C) | 231 | 582 | 2 | 19 | 2.5 | 1 | 1 | 1.0 | 2.5 | ||
| Animals (Metazoa) | 4789 | 858872 | 2 | 13940 | 179.3 | 2 | 199 | 72.9 | 1.8 | ||
| Amphimedon queenslandica (Amphimedon queenslandica) | 3503 | 19571 | 2 | 53 | 5.6 | 1 | 1 | 1.0 | 5.6 | ||
| Eumetazoa | 4312 | 317974 | 2 | 14248 | 73.7 | 2 | 197 | 33.3 | 1.6 | ||
| Bilateria | 3159 | 129332 | 2 | 10313 | 40.9 | 2 | 194 | 19.8 | 1.5 | ||
| Chordates (Chordata) | 253 | 1909 | 2 | 138 | 7.5 | 2 | 5 | 4.5 | 1.4 | ||
| C.intestinalis (Ciona intestinalis) | 249 | 698 | 2 | 13 | 2.8 | 1 | 1 | 1.0 | 2.8 | ||
| Bony vertebrates (Euteleostomi) | 3321 | 20458 | 2 | 1002 | 6.2 | 2 | 4 | 3.9 | 1.3 | ||
| Zebrafish (Danio rerio) | 448 | 2090 | 2 | 139 | 4.7 | 1 | 1 | 1.0 | 4.7 | ||
| Euarchontoglires | 2771 | 11829 | 2 | 543 | 4.3 | 2 | 3 | 2.9 | 1.4 | ||
| Murinae | 447 | 2328 | 2 | 284 | 5.2 | 2 | 2 | 2.0 | 2.6 | ||
| Rat (Rattus norvegicus strain BN/NHsdMcwi) | 78 | 300 | 2 | 25 | 3.8 | 1 | 1 | 1.0 | 3.8 | ||
| Mouse (Mus musculus reference (CL57BL6) strain) | 29 | 93 | 2 | 11 | 3.2 | 1 | 1 | 1.0 | 3.2 | ||
| Human (Homo sapiens) | 161 | 581 | 2 | 26 | 3.6 | 1 | 1 | 1.0 | 3.5 | ||
| Protostomia | 1305 | 53344 | 2 | 4691 | 40.9 | 2 | 187 | 19.0 | 1.7 | ||
| Lophotrochozoa | 298 | 1050 | 2 | 24 | 3.5 | 2 | 2 | 2.0 | 1.8 | ||
| Capitella teleta (Capitella teleta) | 1649 | 8504 | 2 | 50 | 5.2 | 1 | 1 | 1.0 | 5.2 | ||
| Crassostrea gigas (Pacific oyster) - GCA_902806645.1 (Crassostrea gigas) | 1684 | 8685 | 2 | 48 | 5.2 | 1 | 1 | 1.0 | 5.2 | ||
| Protostomia | 545 | 23936 | 2 | 3310 | 43.9 | 2 | 174 | 23.3 | 1.4 | ||
| Arthropods (Arthropoda) | 128 | 569 | 2 | 53 | 4.4 | 2 | 2 | 2.0 | 1.9 | ||
| Drosophila melanogaster (Drosophila melanogaster) | 513 | 1965 | 2 | 55 | 3.8 | 1 | 1 | 1.0 | 3.5 | ||
| Ixodes scapularis (Ixodes scapularis strain Wikel) | 507 | 1620 | 2 | 40 | 3.2 | 1 | 1 | 1.0 | 3.2 | ||
| Protostomia | 1414 | 32733 | 2 | 2028 | 23.1 | 2 | 142 | 10.8 | 1.5 | ||
| Nematodes (Nematoda) | 2042 | 129703 | 2 | 4249 | 63.5 | 2 | 139 | 32.3 | 1.4 | ||
| Chromadorea | 2730 | 161528 | 2 | 3101 | 59.2 | 2 | 122 | 33.2 | 1.5 | ||
| Plectus sambesii (PRJNA390260) (Plectus sambesii strain ES601) | 2489 | 8930 | 2 | 48 | 3.6 | 1 | 1 | 1.0 | 3.6 | ||
| Chromadorea | 8379 | 165791 | 2 | 2071 | 19.8 | 2 | 119 | 14.3 | 1.2 | ||
| Chromadorea | 4017 | 68395 | 2 | 6461 | 17.0 | 2 | 89 | 7.6 | 1.4 | ||
| Tylenchina | 918 | 9863 | 2 | 49 | 10.7 | 2 | 38 | 8.4 | 1.3 | ||
| Steinernema | 2914 | 19824 | 2 | 53 | 6.8 | 2 | 5 | 3.8 | 1.7 | ||
| Steinernema | 930 | 4836 | 2 | 51 | 5.2 | 2 | 4 | 3.0 | 1.7 | ||
| Steinernema | 1472 | 5824 | 2 | 49 | 4.0 | 2 | 2 | 2.0 | 2.0 | ||
| Steinernema scapterisci (PRJNA204942) (Steinernema scapterisci) | 646 | 2347 | 2 | 42 | 3.6 | 1 | 1 | 1.0 | 3.6 | ||
| Steinernema carpocapsae (PRJNA202318) (Steinernema carpocapsae ASM75764v3) | 644 | 1851 | 2 | 21 | 2.9 | 1 | 1 | 1.0 | 2.9 | ||
| Steinernema | 483 | 2348 | 2 | 50 | 4.9 | 2 | 2 | 2.0 | 2.4 | ||
| Steinernema feltiae (PRJNA353610) (Steinernema feltiae strain NW) | 1209 | 7008 | 2 | 55 | 5.8 | 1 | 1 | 1.0 | 5.8 | ||
| Steinernema monticolum (PRJNA205067) (Steinernema monticolum) | 1031 | 4487 | 2 | 54 | 4.4 | 1 | 1 | 1.0 | 4.4 | ||
| Steinernema glaseri (PRJNA204943) (Steinernema glaseri) | 792 | 3760 | 2 | 51 | 4.7 | 1 | 1 | 1.0 | 4.7 | ||
| Tylenchina | 258 | 3098 | 2 | 46 | 12.0 | 2 | 31 | 9.4 | 1.3 | ||
| Strongyloidoidea | 908 | 6493 | 2 | 43 | 7.2 | 2 | 6 | 5.5 | 1.3 | ||
| Rhabditophanes sp. KR3021 (PRJEB1297) (Rhabditophanes sp. KR3021 strain kr 3021) | 408 | 1501 | 2 | 38 | 3.7 | 1 | 1 | 1.0 | 3.7 | ||
| Strongyloididae | 1207 | 7705 | 2 | 50 | 6.4 | 2 | 5 | 4.5 | 1.4 | ||
| Parastrongyloides trichosuri (PRJEB515) (Parastrongyloides trichosuri strain KNP) | 289 | 954 | 2 | 26 | 3.3 | 1 | 1 | 1.0 | 3.3 | ||
| Strongyloides | 626 | 3642 | 2 | 42 | 5.8 | 2 | 4 | 3.3 | 1.8 | ||
| Strongyloides | 128 | 448 | 2 | 42 | 3.5 | 2 | 2 | 2.0 | 1.8 | ||
| Strongyloides ratti (PRJEB125) (Strongyloides ratti) | 66 | 295 | 2 | 19 | 4.5 | 1 | 1 | 1.0 | 4.5 | ||
| Strongyloides stercoralis (PRJEB528) (Strongyloides stercoralis strain PV0001) | 107 | 400 | 2 | 31 | 3.7 | 1 | 1 | 1.0 | 3.7 | ||
| Strongyloides | 705 | 3783 | 2 | 52 | 5.4 | 2 | 2 | 2.0 | 2.7 | ||
| Strongyloides venezuelensis (PRJEB530) (Strongyloides venezuelensis) | 190 | 615 | 2 | 19 | 3.2 | 1 | 1 | 1.0 | 3.2 | ||
| Strongyloides papillosus (PRJEB525) (Strongyloides papillosus strain LIN) | 233 | 703 | 2 | 19 | 3.0 | 1 | 1 | 1.0 | 3.0 | ||
| Tylenchina | 1326 | 15014 | 2 | 56 | 11.3 | 2 | 28 | 7.6 | 1.5 | ||
| Tylenchina | 299 | 2107 | 2 | 46 | 7.0 | 2 | 9 | 4.4 | 1.6 | ||
| Acrobeloides nanus (PRJEB26554) (Acrobeloides nanus) | 2027 | 6984 | 2 | 47 | 3.4 | 1 | 1 | 1.0 | 3.4 | ||
| Panagrolaimidae | 1739 | 11993 | 2 | 49 | 6.9 | 2 | 8 | 4.5 | 1.5 | ||
| Panagrolaimus | 319 | 1509 | 2 | 36 | 4.7 | 2 | 5 | 3.1 | 1.5 | ||
| Panagrolaimus | 3018 | 19469 | 2 | 51 | 6.5 | 2 | 4 | 3.0 | 2.0 | ||
| Panagrolaimus | 850 | 3950 | 2 | 54 | 4.6 | 2 | 2 | 2.0 | 2.3 | ||
| Panagrolaimus sp. 1159 (PRJEB32708) (Panagrolaimus sp. PS1159) | 162 | 366 | 2 | 5 | 2.3 | 1 | 1 | 1.0 | 2.3 | ||
| Panagrolaimus davidi (PRJEB32708) (Panagrolaimus davidi) | 328 | 894 | 2 | 24 | 2.7 | 1 | 1 | 1.0 | 2.7 | ||
| Panagrolaimus | 443 | 1466 | 2 | 45 | 3.3 | 2 | 2 | 2.0 | 1.7 | ||
| Panagrolaimus sp. es5 (PRJEB32708) (Panagrolaimus sp. ES5) | 356 | 968 | 2 | 29 | 2.7 | 1 | 1 | 1.0 | 2.7 | ||
| Panagrolaimus superbus (PRJEB32708) (Panagrolaimus superbus) | 155 | 362 | 2 | 9 | 2.3 | 1 | 1 | 1.0 | 2.3 | ||
| Panagrolaimus sp. ju765 (PRJEB32708) (Panagrolaimus sp. JU765) | 817 | 3276 | 2 | 55 | 4.0 | 1 | 1 | 1.0 | 4.0 | ||
| Panagrolaimidae | 259 | 1085 | 2 | 33 | 4.2 | 2 | 3 | 2.0 | 2.1 | ||
| Halicephalobus sp. nkZ332 (PRJNA555616) (Halicephalobus sp. NKZ332) | 70 | 173 | 2 | 7 | 2.5 | 1 | 1 | 1.0 | 2.5 | ||
| Halicephalobus mephisto (PRJNA528747) (Halicephalobus mephisto) | 79 | 294 | 2 | 41 | 3.7 | 1 | 1 | 1.0 | 3.7 | ||
| Panagrellus redivivus (PRJNA186477) (Panagrellus redivivus) | 1081 | 5247 | 2 | 44 | 4.9 | 1 | 1 | 1.0 | 4.9 | ||
| Tylenchomorpha | 284 | 3453 | 2 | 50 | 12.2 | 2 | 21 | 7.8 | 1.5 | ||
| Aphelenchoididae | 590 | 4102 | 2 | 49 | 7.0 | 2 | 6 | 4.7 | 1.4 | ||
| Pine wood nematodes (Bursaphelenchus) | 1486 | 6393 | 2 | 51 | 4.3 | 2 | 3 | 2.9 | 1.5 | ||
| Bursaphelenchus okinawaensis (PRJEB40023) (Bursaphelenchus okinawaensis strain SH1) | 178 | 673 | 2 | 34 | 3.8 | 1 | 1 | 1.0 | 3.8 | ||
| Pine wood nematode (Bursaphelenchus xylophilus) | 1758 | 5327 | 2 | 37 | 3.0 | 2 | 2 | 2.0 | 1.5 | ||
| Bursaphelenchus xylophilus (PRJEA64437) (Bursaphelenchus xylophilus ASM23113v1_submitted) | 42 | 95 | 2 | 4 | 2.3 | 1 | 1 | 1.0 | 2.3 | ||
| Bursaphelenchus xylophilus (PRJEB40022) (Bursaphelenchus xylophilus strain Ka4C1) | 8 | 20 | 2 | 4 | 2.5 | 1 | 1 | 1.0 | 2.5 | ||
| Aphelenchoides | 355 | 1474 | 2 | 42 | 4.2 | 2 | 3 | 2.5 | 1.6 | ||
| Aphelenchoides | 319 | 1325 | 2 | 33 | 4.2 | 2 | 2 | 2.0 | 2.1 | ||
| Aphelenchoides besseyi (APVT PRJNA834627) (Aphelenchoides besseyi strain APVT) | 170 | 598 | 2 | 30 | 3.5 | 1 | 1 | 1.0 | 3.5 | ||
| Aphelenchoides fujianensis (PRJNA834627) (Aphelenchoides fujianensis strain Dali) | 387 | 1546 | 2 | 35 | 4.0 | 1 | 1 | 1.0 | 4.0 | ||
| Aphelenchoides bicaudatus (PRJNA834627) (Aphelenchoides bicaudatus strain Fsh) | 102 | 326 | 2 | 16 | 3.2 | 1 | 1 | 1.0 | 3.2 | ||
| Tylenchomorpha | 616 | 8675 | 2 | 107 | 14.1 | 2 | 15 | 7.5 | 1.8 | ||
| Ditylenchus | 540 | 1858 | 2 | 36 | 3.4 | 2 | 2 | 2.0 | 1.7 | ||
| Ditylenchus dipsaci (PRJNA498219) (Ditylenchus dipsaci strain pooled J2) | 1440 | 5062 | 2 | 29 | 3.5 | 1 | 1 | 1.0 | 3.5 | ||
| Ditylenchus destructor (PRJNA312427) (Ditylenchus destructor strain Dd01) | 321 | 927 | 2 | 23 | 2.9 | 1 | 1 | 1.0 | 2.9 | ||
| Tylenchoidea | 1465 | 21022 | 2 | 54 | 14.3 | 2 | 13 | 7.5 | 1.9 | ||
| Heteroderinae | 1526 | 13449 | 2 | 57 | 8.8 | 2 | 5 | 3.9 | 2.2 | ||
| Heterodera | 1606 | 10061 | 2 | 53 | 6.3 | 2 | 2 | 2.0 | 3.1 | ||
| Heterodera glycines (PRJNA381081) (Heterodera glycines strain TN10) | 522 | 1394 | 2 | 16 | 2.7 | 1 | 1 | 1.0 | 2.7 | ||
| Heterodera schachtii (PRJNA722882) (Heterodera schachtii strain Bonn) | 585 | 2281 | 2 | 44 | 3.9 | 1 | 1 | 1.0 | 3.9 | ||
| Globodera | 819 | 4276 | 2 | 53 | 5.2 | 2 | 3 | 2.6 | 1.9 | ||
| Globodera rostochiensis (PRJEB13504) (Globodera rostochiensis strain Ro1) | 71 | 173 | 2 | 6 | 2.4 | 1 | 1 | 1.0 | 2.4 | ||
| Globodera pallida | 557 | 2486 | 2 | 37 | 4.5 | 2 | 2 | 2.0 | 2.2 | ||
| Globodera pallida (PRJEB123) (Globodera pallida strain Lindley) | 136 | 316 | 2 | 11 | 2.3 | 1 | 1 | 1.0 | 2.3 | ||
| Globodera pallida (PRJNA764088) (Globodera pallida strain D383) | 240 | 1093 | 2 | 36 | 4.6 | 1 | 1 | 1.0 | 4.6 | ||
| Meloidogyne | 1749 | 23792 | 2 | 57 | 13.6 | 2 | 8 | 5.3 | 2.5 | ||
| Meloidogyne chitwoodi (RACE1 PRJNA666745) (Meloidogyne chitwoodi strain Race1) | 164 | 579 | 2 | 24 | 3.5 | 1 | 1 | 1.0 | 3.5 | ||
| Meloidogyne | 556 | 6051 | 2 | 53 | 10.9 | 2 | 7 | 4.8 | 2.1 | ||
| Meloidogyne graminicola (PRJNA411966) (Meloidogyne graminicola) | 64 | 185 | 2 | 21 | 2.9 | 1 | 1 | 1.0 | 2.9 | ||
| Meloidogyne | 1262 | 14096 | 2 | 57 | 11.2 | 2 | 6 | 3.8 | 2.8 | ||
| Meloidogyne hapla (PRJNA29083) (Meloidogyne hapla strain VW9) | 158 | 469 | 2 | 11 | 3.0 | 1 | 1 | 1.0 | 3.0 | ||
| Meloidogyne | 1855 | 14113 | 2 | 52 | 7.6 | 2 | 5 | 3.2 | 2.2 | ||
| Meloidogyne | 1383 | 10868 | 2 | 55 | 7.9 | 2 | 4 | 2.4 | 3.3 | ||
| Meloidogyne | 50 | 125 | 2 | 6 | 2.5 | 2 | 2 | 2.0 | 1.2 | ||
| Meloidogyne floridensis (PRJNA340324) (Meloidogyne floridensis strain SJF1) | 11 | 24 | 2 | 3 | 2.2 | 1 | 1 | 1.0 | 2.2 | ||
| Meloidogyne incognita (PRJEB8714) (Meloidogyne incognita Meloidogyne_incognita_V3) | 447 | 1219 | 2 | 13 | 2.7 | 1 | 1 | 1.0 | 2.7 | ||
| Meloidogyne incognita group | 207 | 750 | 2 | 55 | 3.6 | 2 | 2 | 2.0 | 1.8 | ||
| Meloidogyne arenaria (PRJNA438575) (Meloidogyne arenaria strain A2-O Okinawa_01) | 656 | 3562 | 2 | 50 | 5.4 | 1 | 1 | 1.0 | 5.4 | ||
| Meloidogyne javanica (PRJNA340324) (Meloidogyne javanica strain VW4) | 62 | 127 | 2 | 3 | 2.0 | 1 | 1 | 1.0 | 2.0 | ||
| Meloidogyne enterolobii (PRJNA340324) (Meloidogyne enterolobii strain L30) | 258 | 635 | 2 | 11 | 2.5 | 1 | 1 | 1.0 | 2.5 | ||
| Chromadorea | 1685 | 31969 | 2 | 860 | 19.0 | 2 | 55 | 14.1 | 1.3 | ||
| Chromadorea | 3243 | 46967 | 2 | 781 | 14.5 | 2 | 44 | 10.7 | 1.3 | ||
| Strongylida | 1096 | 7130 | 2 | 40 | 6.5 | 2 | 17 | 5.2 | 1.2 | ||
| Heterorhabditis bacteriophora (PRJNA13977) (Heterorhabditis bacteriophora strain M31e) | 682 | 2887 | 2 | 44 | 4.2 | 1 | 1 | 1.0 | 4.2 | ||
| Strongylida | 2085 | 15003 | 2 | 47 | 7.2 | 2 | 16 | 5.4 | 1.3 | ||
| Strongylida | 2866 | 18201 | 2 | 57 | 6.4 | 2 | 12 | 3.8 | 1.5 | ||
| Trichostrongyloidea | 324 | 1581 | 2 | 35 | 4.9 | 2 | 5 | 2.7 | 1.7 | ||
| Trichostrongyloidea | 91 | 367 | 2 | 20 | 4.0 | 2 | 2 | 2.0 | 2.0 | ||
| Heligmosomoides polygyrus (PRJEB15396) (Heligmosomoides polygyrus nHp_v2.0) | 550 | 1894 | 2 | 35 | 3.4 | 1 | 1 | 1.0 | 3.4 | ||
| Nippostrongylus brasiliensis (PRJEB511) (Nippostrongylus brasiliensis) | 414 | 1198 | 2 | 17 | 2.9 | 1 | 1 | 1.0 | 2.9 | ||
| Haemonchidae | 167 | 851 | 2 | 37 | 5.1 | 2 | 3 | 2.4 | 2.0 | ||
| Haemonchus | 567 | 2582 | 2 | 53 | 4.6 | 2 | 2 | 2.0 | 2.3 | ||
| Haemonchus contortus (PRJEB506) (Haemonchus contortus haemonchus_contortus_MHCO3ISE_4.0) | 154 | 669 | 2 | 35 | 4.3 | 1 | 1 | 1.0 | 4.3 | ||
| Haemonchus placei (PRJEB509) (Haemonchus placei strain MHpl1) | 127 | 299 | 2 | 10 | 2.4 | 1 | 1 | 1.0 | 2.4 | ||
| Teladorsagia circumcincta (PRJNA72569) (Teladorsagia circumcincta) | 369 | 919 | 2 | 24 | 2.5 | 1 | 1 | 1.0 | 2.5 | ||
| Strongylida | 1672 | 6969 | 2 | 49 | 4.2 | 2 | 7 | 2.8 | 1.4 | ||
| Strongylida | 81 | 253 | 2 | 30 | 3.1 | 2 | 4 | 2.2 | 1.3 | ||
| Necator americanus (PRJNA72135) (Necator americanus strain N. amaericanus Hunan isolate) | 87 | 256 | 2 | 11 | 2.9 | 1 | 1 | 1.0 | 2.9 | ||
| Strongyloidea | 180 | 565 | 2 | 47 | 3.1 | 2 | 3 | 2.2 | 1.4 | ||
| Oesophagostomum dentatum (PRJNA72579) (Oesophagostomum dentatum strain OD-Hann) | 401 | 1042 | 2 | 21 | 2.6 | 1 | 1 | 1.0 | 2.6 | ||
| Strongylidae | 170 | 394 | 2 | 15 | 2.3 | 2 | 2 | 2.0 | 1.2 | ||
| Strongylus vulgaris (PRJEB531) (Strongylus vulgaris strain USA/Kentucky) | 259 | 761 | 2 | 27 | 2.9 | 1 | 1 | 1.0 | 2.9 | ||
| Cylicostephanus goldi (PRJEB498) (Cylicostephanus goldi strain England/Cheshire) | 75 | 172 | 2 | 5 | 2.3 | 1 | 1 | 1.0 | 2.3 | ||
| Ancylostoma | 854 | 3996 | 2 | 47 | 4.7 | 2 | 3 | 2.2 | 2.1 | ||
| Ancylostoma | 257 | 735 | 2 | 22 | 2.9 | 2 | 2 | 2.0 | 1.4 | ||
| Ancylostoma caninum (PRJNA72585) (Ancylostoma caninum strain Baltimore) | 266 | 643 | 2 | 18 | 2.4 | 1 | 1 | 1.0 | 2.4 | ||
| Ancylostoma duodenale (PRJNA72581) (Ancylostoma duodenale strain Baltimore) | 181 | 528 | 2 | 38 | 2.9 | 1 | 1 | 1.0 | 2.9 | ||
| Ancylostoma ceylanicum (PRJNA231479) (Ancylostoma ceylanicum strain HY135) | 1100 | 4349 | 2 | 49 | 4.0 | 1 | 1 | 1.0 | 4.0 | ||
| Strongylida | 56 | 282 | 2 | 35 | 5.0 | 2 | 4 | 2.6 | 1.9 | ||
| Angiostrongylus | 63 | 378 | 2 | 46 | 6.0 | 2 | 3 | 2.3 | 2.7 | ||
| Angiostrongylus | 436 | 1167 | 2 | 30 | 2.7 | 2 | 2 | 2.0 | 1.3 | ||
| Angiostrongylus costaricensis (PRJEB494) (Angiostrongylus costaricensis strain Costa Rica) | 72 | 409 | 2 | 37 | 5.7 | 1 | 1 | 1.0 | 5.7 | ||
| Angiostrongylus vasorum (PRJNA663250) (Angiostrongylus vasorum strain ZH-2019-22) | 119 | 548 | 2 | 50 | 4.6 | 1 | 1 | 1.0 | 4.6 | ||
| Angiostrongylus cantonensis (PRJNA350391) (Angiostrongylus cantonensis strain Guangzhou) | 176 | 730 | 2 | 39 | 4.1 | 1 | 1 | 1.0 | 4.1 | ||
| Dictyocaulus viviparus (PRJNA72587) (Dictyocaulus viviparus D_viviparus_9.2.1.ec.pg) | 55 | 138 | 2 | 11 | 2.5 | 1 | 1 | 1.0 | 2.5 | ||
| Rhabditidae | 107 | 1241 | 2 | 87 | 11.6 | 2 | 28 | 7.9 | 1.7 | ||
| Mesorhabditis belari (PRJEB30104) (Mesorhabditis belari) | 1616 | 7158 | 2 | 54 | 4.4 | 1 | 1 | 1.0 | 4.4 | ||
| Rhabditidae | 138 | 2554 | 2 | 470 | 18.5 | 2 | 27 | 11.8 | 1.6 | ||
| Oscheius tipulae | 1937 | 5428 | 2 | 31 | 2.8 | 2 | 2 | 2.0 | 1.4 | ||
| Oscheius tipulae (PRJNA644888) (Oscheius tipulae strain CEW1) | 46 | 178 | 2 | 21 | 3.9 | 1 | 1 | 1.0 | 3.9 | ||
| Oscheius tipulae (PRJEB15512) (Oscheius tipulae Oscheius_tipulae_assembly_v2) | 24 | 64 | 2 | 8 | 2.7 | 1 | 1 | 1.0 | 2.7 | ||
| Rhabditidae | 288 | 4993 | 2 | 667 | 17.3 | 2 | 25 | 11.0 | 1.5 | ||
| Diploscapter | 1629 | 8424 | 2 | 51 | 5.2 | 2 | 2 | 2.0 | 2.6 | ||
| Diploscapter pachys (PRJNA280107) (Diploscapter pachys strain PF1309) | 312 | 701 | 2 | 14 | 2.2 | 1 | 1 | 1.0 | 2.2 | ||
| Diploscapter coronatus (PRJDB3143) (Diploscapter coronatus strain PDL0010) | 894 | 2590 | 2 | 49 | 2.9 | 1 | 1 | 1.0 | 2.9 | ||
| Caenorhabditis | 644 | 11678 | 2 | 529 | 18.1 | 2 | 23 | 12.5 | 1.4 | ||
| Caenorhabditis | 405 | 8309 | 2 | 471 | 20.5 | 2 | 22 | 12.6 | 1.6 | ||
| Caenorhabditis | 694 | 15316 | 2 | 399 | 22.1 | 2 | 21 | 13.7 | 1.5 | ||
| Caenorhabditis bovis (PRJEB34497) (Caenorhabditis bovis) | 171 | 586 | 2 | 16 | 3.4 | 1 | 1 | 1.0 | 3.4 | ||
| Caenorhabditis | 945 | 14240 | 2 | 827 | 15.1 | 2 | 20 | 8.2 | 1.5 | ||
| Caenorhabditis | 432 | 7697 | 2 | 181 | 17.8 | 2 | 18 | 11.2 | 1.6 | ||
| Caenorhabditis | 2215 | 43042 | 2 | 2721 | 19.4 | 2 | 17 | 9.0 | 1.7 | ||
| Caenorhabditis | 567 | 5830 | 2 | 49 | 10.3 | 2 | 12 | 6.3 | 1.7 | ||
| Caenorhabditis | 50 | 190 | 2 | 36 | 3.8 | 2 | 2 | 2.0 | 1.9 | ||
| Caenorhabditis inopinata (PRJDB5687) (Caenorhabditis inopinata) | 282 | 1572 | 2 | 50 | 5.6 | 1 | 1 | 1.0 | 5.6 | ||
| Caenorhabditis elegans (PRJNA13758) (Caenorhabditis elegans strain N2) | 228 | 747 | 2 | 31 | 3.3 | 1 | 1 | 1.0 | 3.3 | ||
| Caenorhabditis | 950 | 9442 | 2 | 48 | 9.9 | 2 | 10 | 5.1 | 1.9 | ||
| Caenorhabditis | 152 | 627 | 2 | 26 | 4.1 | 2 | 2 | 2.0 | 2.1 | ||
| Caenorhabditis tropicalis (PRJNA53597) (Caenorhabditis tropicalis) | 366 | 1606 | 2 | 55 | 4.4 | 1 | 1 | 1.0 | 4.4 | ||
| Caenorhabditis brenneri (PRJNA20035) (Caenorhabditis brenneri) | 953 | 3335 | 2 | 39 | 3.5 | 1 | 1 | 1.0 | 3.5 | ||
| Caenorhabditis | 563 | 4886 | 2 | 57 | 8.7 | 2 | 8 | 4.4 | 1.9 | ||
| Caenorhabditis | 482 | 3088 | 2 | 40 | 6.4 | 2 | 5 | 3.5 | 1.8 | ||
| Caenorhabditis | 968 | 3994 | 2 | 55 | 4.1 | 2 | 2 | 2.0 | 2.1 | ||
| Caenorhabditis briggsae (PRJNA10731) (Caenorhabditis briggsae CB4) | 66 | 177 | 2 | 10 | 2.7 | 1 | 1 | 1.0 | 2.7 | ||
| Caenorhabditis nigoni (PRJNA384657) (Caenorhabditis nigoni strain JU1422) | 446 | 1512 | 2 | 56 | 3.4 | 1 | 1 | 1.0 | 3.4 | ||
| Caenorhabditis | 969 | 4635 | 2 | 47 | 4.8 | 2 | 3 | 2.4 | 2.0 | ||
| Caenorhabditis | 151 | 407 | 2 | 44 | 2.7 | 2 | 2 | 2.0 | 1.3 | ||
| Caenorhabditis zanzibari (PRJEB12596) (Caenorhabditis zanzibari strain JU2190) | 191 | 621 | 2 | 37 | 3.3 | 1 | 1 | 1.0 | 3.3 | ||
| Caenorhabditis tribulationis (PRJEB12608) (Caenorhabditis tribulationis strain JU2818) | 448 | 1965 | 2 | 51 | 4.4 | 1 | 1 | 1.0 | 4.4 | ||
| Caenorhabditis sinica (PRJNA194557) (Caenorhabditis sinica) | 865 | 3319 | 2 | 44 | 3.8 | 1 | 1 | 1.0 | 3.8 | ||
| Caenorhabditis | 1863 | 9802 | 2 | 46 | 5.3 | 2 | 3 | 2.7 | 1.9 | ||
| Caenorhabditis remanei | 427 | 1821 | 2 | 44 | 4.3 | 2 | 2 | 2.0 | 2.1 | ||
| Caenorhabditis remanei (PRJNA577507) (Caenorhabditis remanei strain PX506) | 68 | 171 | 2 | 6 | 2.5 | 1 | 1 | 1.0 | 2.5 | ||
| Caenorhabditis remanei (PRJNA53967) (Caenorhabditis remanei C_remanei-15.0.1) | 93 | 252 | 2 | 10 | 2.7 | 1 | 1 | 1.0 | 2.7 | ||
| Caenorhabditis latens (PRJNA248912) (Caenorhabditis latens) | 120 | 268 | 2 | 6 | 2.2 | 1 | 1 | 1.0 | 2.2 | ||
| Caenorhabditis | 209 | 881 | 2 | 40 | 4.2 | 2 | 5 | 2.6 | 1.5 | ||
| Caenorhabditis | 212 | 1182 | 2 | 40 | 5.6 | 2 | 4 | 3.0 | 1.8 | ||
| Caenorhabditis | 686 | 3896 | 2 | 41 | 5.7 | 2 | 3 | 2.5 | 2.3 | ||
| Caenorhabditis | 187 | 800 | 2 | 44 | 4.3 | 2 | 2 | 2.0 | 2.1 | ||
| Caenorhabditis waitukubuli (PRJEB12602) (Caenorhabditis waitukubuli strain NIC564) | 812 | 2691 | 2 | 52 | 3.3 | 1 | 1 | 1.0 | 3.3 | ||
| Caenorhabditis panamensis (PRJEB28259) (Caenorhabditis panamensis) | 393 | 1221 | 2 | 27 | 3.1 | 1 | 1 | 1.0 | 3.1 | ||
| Caenorhabditis becei (PRJEB28243) (Caenorhabditis becei strain QG2083) | 668 | 2353 | 2 | 28 | 3.5 | 1 | 1 | 1.0 | 3.5 | ||
| Caenorhabditis sulstoni (PRJEB12601) (Caenorhabditis sulstoni strain JU2788) | 342 | 1128 | 2 | 23 | 3.3 | 1 | 1 | 1.0 | 3.3 | ||
| Caenorhabditis japonica (PRJNA12591) (Caenorhabditis japonica) | 861 | 4580 | 2 | 59 | 5.3 | 1 | 1 | 1.0 | 5.3 | ||
| Caenorhabditis uteleia (PRJEB12600) (Caenorhabditis uteleia strain JU2585) | 1304 | 7747 | 2 | 51 | 5.9 | 1 | 1 | 1.0 | 5.9 | ||
| Caenorhabditis | 555 | 2401 | 2 | 44 | 4.3 | 2 | 2 | 2.0 | 2.2 | ||
| Caenorhabditis angaria (PRJNA51225) (Caenorhabditis angaria) | 749 | 2077 | 2 | 18 | 2.8 | 1 | 1 | 1.0 | 2.8 | ||
| Caenorhabditis quiockensis (PRJEB11354) (Caenorhabditis quiockensis strain JU2809) | 711 | 3445 | 2 | 48 | 4.8 | 1 | 1 | 1.0 | 4.8 | ||
| Caenorhabditis auriculariae (PRJEB40642) (Caenorhabditis auriculariae strain NKZ352) | 343 | 1294 | 2 | 26 | 3.8 | 1 | 1 | 1.0 | 3.8 | ||
| Caenorhabditis parvicauda (PRJEB12595) (Caenorhabditis parvicauda) | 532 | 2142 | 2 | 56 | 4.0 | 1 | 1 | 1.0 | 4.0 | ||
| Diplogasteroidea | 1598 | 18076 | 2 | 53 | 11.3 | 2 | 10 | 7.4 | 1.5 | ||
| Diplogasteroidea | 1111 | 10584 | 2 | 50 | 9.5 | 2 | 9 | 5.8 | 1.6 | ||
| Parapristionchus giblindavisi (PRJEB53331) (Parapristionchus giblindavisi) | 892 | 3047 | 2 | 51 | 3.4 | 1 | 1 | 1.0 | 3.4 | ||
| Pristionchus | 2155 | 20837 | 2 | 54 | 9.7 | 2 | 8 | 5.1 | 1.8 | ||
| Pristionchus | 1820 | 14784 | 2 | 55 | 8.1 | 2 | 7 | 3.9 | 1.8 | ||
| Pristionchus | 940 | 5697 | 2 | 49 | 6.1 | 2 | 6 | 3.3 | 1.7 | ||
| Pristionchus mayeri (PRJEB27334) (Pristionchus mayeri) | 1041 | 2964 | 2 | 43 | 2.8 | 1 | 1 | 1.0 | 2.8 | ||
| Pristionchus | 1728 | 10525 | 2 | 45 | 6.1 | 2 | 5 | 3.2 | 1.8 | ||
| Pristionchus | 1055 | 4825 | 2 | 37 | 4.6 | 2 | 4 | 2.9 | 1.5 | ||
| Pristionchus maxplancki (PRJEB27334) (Pristionchus maxplancki) | 1012 | 2275 | 2 | 16 | 2.2 | 1 | 1 | 1.0 | 2.2 | ||
| Pristionchus | 1649 | 5871 | 2 | 53 | 3.6 | 2 | 3 | 2.4 | 1.5 | ||
| Pristionchus arcanus (PRJEB27334) (Pristionchus arcanus) | 662 | 1495 | 2 | 31 | 2.3 | 1 | 1 | 1.0 | 2.3 | ||
| Pristionchus | 336 | 955 | 2 | 12 | 2.8 | 2 | 2 | 2.0 | 1.4 | ||
| Pristionchus pacificus (PRJNA12644) (Pristionchus pacificus strain PS312) | 214 | 660 | 2 | 28 | 3.1 | 1 | 1 | 1.0 | 3.1 | ||
| Pristionchus exspectatus (PRJEB46690) (Pristionchus exspectatus) | 364 | 885 | 2 | 12 | 2.4 | 1 | 1 | 1.0 | 2.4 | ||
| Pristionchus japonicus (PRJEB27334) (Pristionchus japonicus) | 965 | 2330 | 2 | 22 | 2.4 | 1 | 1 | 1.0 | 2.4 | ||
| Pristionchus entomophagus (PRJEB27334) (Pristionchus entomophagus) | 813 | 2047 | 2 | 37 | 2.5 | 1 | 1 | 1.0 | 2.5 | ||
| Pristionchus fissidentatus (PRJEB27334) (Pristionchus fissidentatus) | 1141 | 3321 | 2 | 44 | 2.9 | 1 | 1 | 1.0 | 2.9 | ||
| Micoletzkya japonica (PRJEB27334) (Micoletzkya japonica) | 907 | 2504 | 2 | 26 | 2.8 | 1 | 1 | 1.0 | 2.8 | ||
| Spirurina | 820 | 11006 | 2 | 53 | 13.4 | 2 | 25 | 11.2 | 1.2 | ||
| Oxyuridae | 420 | 957 | 2 | 9 | 2.3 | 2 | 2 | 2.0 | 1.1 | ||
| Syphacia muris (PRJEB524) (Syphacia muris strain Spain/Valencia) | 50 | 143 | 2 | 7 | 2.9 | 1 | 1 | 1.0 | 2.9 | ||
| Enterobius vermicularis (PRJEB503) (Enterobius vermicularis strain Spain/Canary Islands) | 122 | 334 | 2 | 10 | 2.7 | 1 | 1 | 1.0 | 2.7 | ||
| Spirurina | 1775 | 12964 | 2 | 47 | 7.3 | 2 | 23 | 6.2 | 1.2 | ||
| Spirurina | 875 | 10229 | 2 | 54 | 11.7 | 2 | 17 | 10.0 | 1.1 | ||
| Spirurina | 83 | 505 | 2 | 41 | 6.1 | 2 | 16 | 3.8 | 1.5 | ||
| Dracunculus medinensis (PRJEB500) (Dracunculus medinensis) | 94 | 615 | 2 | 42 | 6.5 | 1 | 1 | 1.0 | 6.5 | ||
| Spiruromorpha | 895 | 3939 | 2 | 46 | 4.4 | 2 | 14 | 3.7 | 1.2 | ||
| Gongylonema pulchrum (PRJEB505) (Gongylonema pulchrum strain Japan/Hokkaido) | 962 | 2276 | 2 | 17 | 2.4 | 1 | 1 | 1.0 | 2.4 | ||
| Spiruromorpha | 186 | 1315 | 2 | 37 | 7.1 | 2 | 14 | 6.1 | 1.1 | ||
| Onchocercidae | 743 | 4017 | 2 | 55 | 5.4 | 2 | 13 | 4.2 | 1.2 | ||
| Onchocercidae | 68 | 234 | 2 | 17 | 3.4 | 2 | 4 | 2.6 | 1.3 | ||
| Dirofilaria immitis (PRJEB1797) (Dirofilaria immitis nDi.2.2) | 38 | 92 | 2 | 6 | 2.4 | 1 | 1 | 1.0 | 2.4 | ||
| Onchocerca | 101 | 276 | 2 | 8 | 2.7 | 2 | 3 | 2.5 | 1.1 | ||
| Onchocerca | 429 | 898 | 2 | 9 | 2.1 | 2 | 2 | 2.0 | 1.0 | ||
| Onchocerca volvulus (PRJEB513) (Onchocerca volvulus strain O. volvulus Cameroon isolate) | 26 | 62 | 2 | 5 | 2.4 | 1 | 1 | 1.0 | 2.4 | ||
| Onchocerca ochengi (PRJEB1204) (Onchocerca ochengi strain Ngaoundere) | 34 | 95 | 2 | 16 | 2.8 | 1 | 1 | 1.0 | 2.8 | ||
| Onchocerca flexuosa (PRJNA230512) (Onchocerca flexuosa strain Red Deer) | 9 | 18 | 2 | 2 | 2.0 | 1 | 1 | 1.0 | 2.0 | ||
| Onchocercidae | 252 | 911 | 2 | 44 | 3.6 | 2 | 8 | 2.9 | 1.2 | ||
| Onchocercidae | 18 | 40 | 2 | 3 | 2.2 | 2 | 3 | 2.2 | 1.0 | ||
| Onchocercidae | 11 | 25 | 2 | 3 | 2.3 | 2 | 3 | 2.3 | 1.0 | ||
| Litomosoides sigmodontis (PRJEB3075) (Litomosoides sigmodontis strain Bain lab strain) | 8 | 17 | 2 | 3 | 2.1 | 1 | 1 | 1.0 | 2.1 | ||
| Onchocercidae | 14 | 41 | 2 | 11 | 2.9 | 2 | 2 | 2.0 | 1.5 | ||
| Cercopithifilaria johnstoni (PRJEB47283) (Cercopithifilaria johnstoni) | 18 | 61 | 2 | 8 | 3.4 | 1 | 1 | 1.0 | 3.4 | ||
| Acanthocheilonema viteae (PRJEB1697) (Acanthocheilonema viteae) | 25 | 68 | 2 | 8 | 2.7 | 1 | 1 | 1.0 | 2.7 | ||
| Elaeophora elaphi (PRJEB502) (Elaeophora elaphi) | 1 | 3 | 3 | 3 | 3.0 | 1 | 1 | 1.0 | 3.0 | ||
| Onchocercidae | 52 | 196 | 2 | 24 | 3.8 | 2 | 5 | 2.7 | 1.4 | ||
| Onchocercidae | 170 | 638 | 2 | 53 | 3.8 | 2 | 4 | 2.6 | 1.4 | ||
| Wuchereria bancrofti (PRJNA275548) (Wuchereria bancrofti strain pt0022) | 10 | 20 | 2 | 2 | 2.0 | 1 | 1 | 1.0 | 2.0 | ||
| Brugia | 381 | 994 | 2 | 30 | 2.6 | 2 | 3 | 2.2 | 1.2 | ||
| Brugia | 83 | 175 | 2 | 4 | 2.1 | 2 | 2 | 2.0 | 1.1 | ||
| Brugia timori (PRJEB4663) (Brugia timori strain Flores island/ Indonesia) | 16 | 37 | 2 | 4 | 2.3 | 1 | 1 | 1.0 | 2.3 | ||
| Brugia malayi (PRJNA10729) (Brugia malayi strain FR3) | 11 | 26 | 2 | 4 | 2.4 | 1 | 1 | 1.0 | 2.4 | ||
| Brugia pahangi (PRJEB497) (Brugia pahangi strain Scotland/Glasgow) | 59 | 130 | 2 | 4 | 2.2 | 1 | 1 | 1.0 | 2.2 | ||
| Loa loa (PRJNA24608) (Loa loa strain CAT) | 97 | 504 | 2 | 34 | 5.2 | 1 | 1 | 1.0 | 5.2 | ||
| Thelazia callipaeda (PRJEB1205) (Thelazia callipaeda strain Switzerland/Ticino) | 56 | 183 | 2 | 14 | 3.3 | 1 | 1 | 1.0 | 3.3 | ||
| Setaria digitata (PRJNA479729) (Setaria digitata strain RSCHEM2018) | 3 | 6 | 2 | 2 | 2.0 | 1 | 1 | 1.0 | 2.0 | ||
| Ascaridoidea | 909 | 3980 | 2 | 39 | 4.4 | 2 | 6 | 3.3 | 1.3 | ||
| Anisakis simplex (PRJEB496) (Anisakis simplex) | 709 | 1552 | 2 | 16 | 2.2 | 1 | 1 | 1.0 | 2.2 | ||
| Ascaridoidea | 842 | 3227 | 2 | 37 | 3.8 | 2 | 5 | 3.2 | 1.2 | ||
| Toxocara canis (PRJNA248777) (Toxocara canis strain PN_DK_2014) | 151 | 490 | 2 | 23 | 3.2 | 1 | 1 | 1.0 | 3.2 | ||
| Ascarididae | 773 | 2267 | 2 | 47 | 2.9 | 2 | 4 | 2.5 | 1.2 | ||
| Ascaris | 658 | 1509 | 2 | 22 | 2.3 | 2 | 2 | 2.0 | 1.1 | ||
| Ascaris lumbricoides (PRJEB4950) (Ascaris lumbricoides strain Republic of Ecuador) | 167 | 359 | 2 | 5 | 2.1 | 1 | 1 | 1.0 | 2.1 | ||
| Ascaris suum (PRJNA62057) (Ascaris suum strain AG01) | 49 | 129 | 2 | 24 | 2.6 | 1 | 1 | 1.0 | 2.6 | ||
| Parascaris | 69 | 162 | 2 | 7 | 2.3 | 2 | 2 | 2.0 | 1.2 | ||
| Parascaris univalens (PRJNA386823) (Parascaris univalens strain PG01) | 53 | 156 | 2 | 13 | 2.9 | 1 | 1 | 1.0 | 2.9 | ||
| Parascaris equorum (PRJEB514) (Parascaris equorum) | 10 | 22 | 2 | 3 | 2.2 | 1 | 1 | 1.0 | 2.2 | ||
| Dorylaimia | 332 | 3039 | 2 | 37 | 9.2 | 2 | 17 | 7.7 | 1.2 | ||
| Dorylaimia | 366 | 3535 | 2 | 45 | 9.7 | 2 | 16 | 7.9 | 1.2 | ||
| Soboliphyme baturini (PRJEB516) (Soboliphyme baturini strain Alaska/Dall Island) | 149 | 565 | 2 | 38 | 3.8 | 1 | 1 | 1.0 | 3.8 | ||
| Trichinellida | 555 | 7137 | 2 | 49 | 12.9 | 2 | 15 | 10.2 | 1.3 | ||
| Trichuris | 911 | 4492 | 2 | 50 | 4.9 | 2 | 3 | 2.6 | 1.9 | ||
| Trichuris | 235 | 683 | 2 | 26 | 2.9 | 2 | 2 | 2.0 | 1.5 | ||
| Trichuris trichiura (PRJEB535) (Trichuris trichiura strain Republic of Ecuador) | 165 | 988 | 2 | 52 | 6.0 | 1 | 1 | 1.0 | 6.0 | ||
| Trichuris suis (PRJNA179528) (Trichuris suis T_suis_1.0.allpaths) | 30 | 78 | 2 | 9 | 2.6 | 1 | 1 | 1.0 | 2.6 | ||
| Trichuris muris (PRJEB126) (Trichuris muris) | 422 | 1590 | 2 | 49 | 3.8 | 1 | 1 | 1.0 | 3.8 | ||
| Trichinella | 2970 | 31066 | 2 | 56 | 10.5 | 2 | 12 | 7.1 | 1.4 | ||
| Trichinella | 568 | 2550 | 2 | 39 | 4.5 | 2 | 3 | 2.4 | 1.8 | ||
| Trichinella pseudospiralis (ISS13 PRJNA257433) (Trichinella pseudospiralis strain ISS13) | 445 | 1678 | 2 | 40 | 3.8 | 1 | 1 | 1.0 | 3.8 | ||
| Trichinella | 831 | 3056 | 2 | 34 | 3.7 | 2 | 2 | 2.0 | 1.8 | ||
| Trichinella papuae (PRJNA257433) (Trichinella papuae strain ISS1980) | 124 | 294 | 2 | 4 | 2.4 | 1 | 1 | 1.0 | 2.4 | ||
| Trichinella zimbabwensis (PRJNA257433) (Trichinella zimbabwensis strain ISS1029) | 389 | 1276 | 2 | 34 | 3.3 | 1 | 1 | 1.0 | 3.3 | ||
| Trichinella | 3136 | 23362 | 2 | 50 | 7.4 | 2 | 9 | 4.8 | 1.4 | ||
| Trichinella | 1438 | 8236 | 2 | 41 | 5.7 | 2 | 7 | 3.9 | 1.4 | ||
| Trichinella patagoniensis (PRJNA257433) (Trichinella patagoniensis strain ISS2496) | 141 | 337 | 2 | 9 | 2.4 | 1 | 1 | 1.0 | 2.4 | ||
| Trichinella | 1316 | 5529 | 2 | 54 | 4.2 | 2 | 6 | 3.1 | 1.3 | ||
| Trichinella | 149 | 388 | 2 | 22 | 2.6 | 2 | 2 | 2.0 | 1.3 | ||
| Trichinella sp. T6 (PRJNA257433) (Trichinella sp. T6 strain ISS34) | 90 | 258 | 2 | 13 | 2.9 | 1 | 1 | 1.0 | 2.9 | ||
| Trichinella nativa (PRJNA257433) (Trichinella nativa strain ISS10) | 35 | 80 | 2 | 4 | 2.3 | 1 | 1 | 1.0 | 2.3 | ||
| Trichinella | 562 | 1727 | 2 | 14 | 3.1 | 2 | 4 | 2.5 | 1.2 | ||
| Trichinella | 140 | 380 | 2 | 17 | 2.7 | 2 | 2 | 2.0 | 1.4 | ||
| Trichinella britovi (PRJNA257433) (Trichinella britovi strain ISS120) | 116 | 327 | 2 | 15 | 2.8 | 1 | 1 | 1.0 | 2.8 | ||
| Trichinella sp. T8 (PRJNA257433) (Trichinella sp. T8 strain ISS272) | 45 | 99 | 2 | 3 | 2.2 | 1 | 1 | 1.0 | 2.2 | ||
| Trichinella | 77 | 167 | 2 | 4 | 2.2 | 2 | 2 | 2.0 | 1.1 | ||
| Trichinella sp. T9 (PRJNA257433) (Trichinella sp. T9 strain ISS409) | 58 | 164 | 2 | 14 | 2.8 | 1 | 1 | 1.0 | 2.8 | ||
| Trichinella murrelli (PRJNA257433) (Trichinella murrelli strain ISS417) | 52 | 148 | 2 | 18 | 2.8 | 1 | 1 | 1.0 | 2.8 | ||
| Trichinella | 115 | 320 | 2 | 22 | 2.8 | 2 | 2 | 2.0 | 1.4 | ||
| Trichinella nelsoni (PRJNA257433) (Trichinella nelsoni strain ISS37) | 91 | 219 | 2 | 7 | 2.4 | 1 | 1 | 1.0 | 2.4 | ||
| Trichinella spiralis (PRJNA12603) (Trichinella spiralis strain ISS 195) | 206 | 509 | 2 | 17 | 2.5 | 1 | 1 | 1.0 | 2.5 | ||
| Romanomermis culicivorax (PRJEB1358) (Romanomermis culicivorax) | 3283 | 15065 | 2 | 57 | 4.6 | 1 | 1 | 1.0 | 4.6 | ||
| Flatworms (Platyhelminthes) | 774 | 15042 | 2 | 53 | 19.4 | 2 | 46 | 16.2 | 1.3 | ||
| Rhabditophora | 123 | 726 | 2 | 38 | 5.9 | 2 | 2 | 2.0 | 3.0 | ||
| Schmidtea mediterranea (S2F19 HAP1 PRJNA885486) (Schmidtea mediterranea strain S2F19) | 683 | 2623 | 2 | 54 | 3.8 | 1 | 1 | 1.0 | 3.8 | ||
| Macrostomum lignano (PRJNA371498) (Macrostomum lignano strain DV1) | 3759 | 14373 | 2 | 39 | 3.8 | 1 | 1 | 1.0 | 3.8 | ||
| Flatworms (Platyhelminthes) | 3876 | 31346 | 2 | 46 | 8.1 | 2 | 37 | 6.7 | 1.2 | ||
| Flatworms (Platyhelminthes) | 992 | 9188 | 2 | 46 | 9.3 | 2 | 29 | 8.1 | 1.1 | ||
| Monogenea | 61 | 151 | 2 | 9 | 2.5 | 2 | 3 | 2.2 | 1.1 | ||
| Protopolystoma xenopodis (PRJEB1201) (Protopolystoma xenopodis) | 791 | 2783 | 2 | 54 | 3.5 | 1 | 1 | 1.0 | 3.5 | ||
| Gyrodactylus | 1229 | 3190 | 2 | 45 | 2.6 | 2 | 2 | 2.0 | 1.3 | ||
| Gyrodactylus salaris (PRJNA244375) (Gyrodactylus salaris strain Lier) | 199 | 519 | 2 | 10 | 2.6 | 1 | 1 | 1.0 | 2.6 | ||
| Gyrodactylus bullatarudis (PRJNA532341) (Gyrodactylus bullatarudis strain Rox2016) | 288 | 1228 | 2 | 31 | 4.3 | 1 | 1 | 1.0 | 4.3 | ||
| Flukes (Digenea) | 1568 | 22333 | 2 | 53 | 14.2 | 2 | 26 | 12.0 | 1.2 | ||
| Blood flukes (Schistosomatidae) | 953 | 10825 | 2 | 48 | 11.4 | 2 | 15 | 8.7 | 1.3 | ||
| Schistosoma | 111 | 978 | 2 | 43 | 8.8 | 2 | 12 | 6.2 | 1.4 | ||
| Schistosoma japonicum (PRJNA520774) (Schistosoma japonicum strain HuSjv2) | 93 | 308 | 2 | 14 | 3.3 | 1 | 1 | 1.0 | 3.3 | ||
| Schistosoma | 123 | 1026 | 2 | 48 | 8.3 | 2 | 11 | 5.4 | 1.4 | ||
| Schistosoma turkestanicum (PRJEB44434) (Schistosoma turkestanicum strain tdSchTurk1.1) | 105 | 303 | 2 | 28 | 2.9 | 1 | 1 | 1.0 | 2.9 | ||
| Schistosoma | 187 | 1858 | 2 | 53 | 9.9 | 2 | 10 | 5.1 | 1.8 | ||
| Schistosoma | 138 | 941 | 2 | 52 | 6.8 | 2 | 8 | 3.6 | 1.6 | ||
| Schistosoma | 4 | 10 | 2 | 4 | 2.5 | 2 | 2 | 2.0 | 1.2 | ||
| Schistosoma margrebowiei (PRJEB44434) (Schistosoma margrebowiei strain tdSchMarg1.1) | 9 | 24 | 2 | 4 | 2.7 | 1 | 1 | 1.0 | 2.7 | ||
| Schistosoma spindale (PRJEB44434) (Schistosoma spindale strain tdSchSpin1.1) | 5 | 12 | 2 | 4 | 2.4 | 1 | 1 | 1.0 | 2.4 | ||
| Schistosoma | 58 | 274 | 2 | 33 | 4.7 | 2 | 6 | 3.0 | 1.4 | ||
| Schistosoma mattheei (PRJEB44434) (Schistosoma mattheei strain tdSchMatt1.1) | 9 | 23 | 2 | 6 | 2.6 | 1 | 1 | 1.0 | 2.6 | ||
| Schistosoma | 45 | 122 | 2 | 6 | 2.7 | 2 | 4 | 2.5 | 1.1 | ||
| Schistosoma | 16 | 46 | 2 | 7 | 2.9 | 2 | 3 | 2.1 | 1.4 | ||
| Schistosoma haematobium (PRJNA78265) (Schistosoma haematobium UoM_Shae.V3) | 8 | 17 | 2 | 3 | 2.1 | 1 | 1 | 1.0 | 2.1 | ||
| Schistosoma | 26 | 56 | 2 | 4 | 2.2 | 2 | 3 | 2.1 | 1.0 | ||
| Schistosoma | 9 | 21 | 2 | 4 | 2.3 | 2 | 2 | 2.0 | 1.2 | ||
| Schistosoma curassoni (PRJEB44434) (Schistosoma curassoni strain tdSchCurr1.1) | 3 | 8 | 2 | 3 | 2.7 | 1 | 1 | 1.0 | 2.7 | ||
| Schistosoma bovis (TD1 PRJEB44434) (Schistosoma bovis strain tdSchBovi1.1) | 7 | 27 | 2 | 10 | 3.9 | 1 | 1 | 1.0 | 3.9 | ||
| Schistosoma guineensis (PRJEB44434) (Schistosoma guineensis strain tdSchGuin1.1) | 3 | 6 | 2 | 2 | 2.0 | 1 | 1 | 1.0 | 2.0 | ||
| Schistosoma intercalatum (TD1 PRJEB44434) (Schistosoma intercalatum strain tdSchInte1.1) | 8 | 16 | 2 | 2 | 2.0 | 1 | 1 | 1.0 | 2.0 | ||
| Schistosoma | 35 | 125 | 2 | 15 | 3.6 | 2 | 2 | 2.0 | 1.8 | ||
| Schistosoma rodhaini (TD1 PRJEB44434) (Schistosoma rodhaini strain tdSchRodh1.1) | 13 | 33 | 2 | 5 | 2.5 | 1 | 1 | 1.0 | 2.5 | ||
| Schistosoma mansoni (PRJEA36577) (Schistosoma mansoni) | 25 | 67 | 2 | 7 | 2.7 | 1 | 1 | 1.0 | 2.7 | ||
| Blood flukes (Schistosomatidae) | 170 | 775 | 2 | 45 | 4.6 | 2 | 3 | 2.5 | 1.8 | ||
| Heterobilharzia americana (TD1 PRJEB44434) (Heterobilharzia americana strain tdHetHame1.1) | 53 | 129 | 2 | 7 | 2.4 | 1 | 1 | 1.0 | 2.4 | ||
| Trichobilharzia | 308 | 1994 | 2 | 56 | 6.5 | 2 | 2 | 2.0 | 3.2 | ||
| Trichobilharzia regenti (PRJEB44434) (Trichobilharzia regenti strain tdTriRege1.1) | 146 | 638 | 2 | 53 | 4.4 | 1 | 1 | 1.0 | 4.4 | ||
| Trichobilharzia szidati (PRJEB44434) (Trichobilharzia szidati strain tdTriSzid1.1) | 91 | 253 | 2 | 12 | 2.8 | 1 | 1 | 1.0 | 2.8 | ||
| Flukes (Digenea) | 1075 | 7233 | 2 | 47 | 6.7 | 2 | 11 | 4.8 | 1.4 | ||
| Flukes (Digenea) | 43 | 177 | 2 | 27 | 4.1 | 2 | 5 | 2.7 | 1.6 | ||
| Flukes (Digenea) | 96 | 388 | 2 | 47 | 4.0 | 2 | 4 | 2.9 | 1.4 | ||
| Opisthorchiidae | 988 | 4698 | 2 | 42 | 4.8 | 2 | 3 | 2.3 | 2.2 | ||
| Clonorchis sinensis (PRJNA386618) (Clonorchis sinensis strain Cs-k2) | 121 | 414 | 2 | 42 | 3.4 | 1 | 1 | 1.0 | 3.4 | ||
| Opisthorchis | 57 | 144 | 2 | 8 | 2.5 | 2 | 2 | 2.0 | 1.3 | ||
| Opisthorchis viverrini (PRJNA222628) (Opisthorchis viverrini) | 280 | 817 | 2 | 17 | 2.9 | 1 | 1 | 1.0 | 2.9 | ||
| Opisthorchis felineus (PRJNA413383) (Opisthorchis felineus strain AK-0245) | 34 | 70 | 2 | 3 | 2.1 | 1 | 1 | 1.0 | 2.1 | ||
| Paragonimus westermani (PRJNA454344) (Paragonimus westermani) | 116 | 391 | 2 | 17 | 3.4 | 1 | 1 | 1.0 | 3.4 | ||
| Atriophallophorus winterbourni (PRJNA636673) (Atriophallophorus winterbourni strain NZ2018) | 240 | 1368 | 2 | 53 | 5.7 | 1 | 1 | 1.0 | 5.7 | ||
| Plagiorchiida | 122 | 558 | 2 | 29 | 4.6 | 2 | 6 | 2.8 | 1.7 | ||
| Dicrocoelium dendriticum (PRJEB44434) (Dicrocoelium dendriticum strain tdDicDend1.1) | 323 | 1341 | 2 | 31 | 4.2 | 1 | 1 | 1.0 | 4.2 | ||
| Echinostomatoidea | 1229 | 4661 | 2 | 40 | 3.8 | 2 | 5 | 3.1 | 1.2 | ||
| Echinostoma caproni (PRJEB1207) (Echinostoma caproni strain Egypt) | 305 | 1848 | 2 | 49 | 6.1 | 1 | 1 | 1.0 | 6.1 | ||
| Fasciola | 401 | 1333 | 2 | 27 | 3.3 | 2 | 3 | 2.4 | 1.4 | ||
| Fasciola gigantica (PRJNA230515) (Fasciola gigantica strain Uganda_cow_1) | 46 | 125 | 2 | 8 | 2.7 | 1 | 1 | 1.0 | 2.7 | ||
| Liver fluke (Fasciola hepatica) | 63 | 145 | 2 | 8 | 2.3 | 2 | 2 | 2.0 | 1.2 | ||
| Fasciola hepatica (PRJEB25283) (Fasciola hepatica Fasciola_10x_pilon) | 18 | 37 | 2 | 3 | 2.1 | 1 | 1 | 1.0 | 2.1 | ||
| Fasciola hepatica (PRJNA179522) (Fasciola hepatica F_hepatica_1.0.allpaths.pg) | 7 | 16 | 2 | 3 | 2.3 | 1 | 1 | 1.0 | 2.3 | ||
| Fasciolopsis buski (PRJNA284521) (Fasciolopsis buski strain HT) | 12 | 25 | 2 | 3 | 2.1 | 1 | 1 | 1.0 | 2.1 | ||
| Eucestoda | 1982 | 18696 | 2 | 46 | 9.4 | 2 | 17 | 7.4 | 1.3 | ||
| Cyclophyllidea | 832 | 9024 | 2 | 55 | 10.8 | 2 | 14 | 8.8 | 1.3 | ||
| Mesocestoides corti (PRJEB510) (Mesocestoides corti strain Specht & Voge 1965) | 446 | 2315 | 2 | 39 | 5.2 | 1 | 1 | 1.0 | 5.2 | ||
| Cyclophyllidea | 579 | 3728 | 2 | 45 | 6.4 | 2 | 13 | 5.0 | 1.2 | ||
| Taeniidae | 602 | 4900 | 2 | 48 | 8.1 | 2 | 10 | 5.5 | 1.4 | ||
| Taeniidae | 103 | 674 | 2 | 39 | 6.5 | 2 | 5 | 3.0 | 1.8 | ||
| Taenia | 405 | 3815 | 2 | 54 | 9.4 | 2 | 4 | 3.1 | 2.7 | ||
| Taenia solium (PRJNA170813) (Taenia solium strain Mexico) | 34 | 83 | 2 | 4 | 2.4 | 1 | 1 | 1.0 | 2.4 | ||
| Taenia | 343 | 2842 | 2 | 50 | 8.3 | 2 | 3 | 2.7 | 2.9 | ||
| Taenia | 1206 | 3866 | 2 | 48 | 3.2 | 2 | 2 | 2.0 | 1.6 | ||
| Taenia saginata (PRJNA71493) (Taenia saginata strain TSAYD01) | 41 | 94 | 2 | 4 | 2.3 | 1 | 1 | 1.0 | 2.3 | ||
| Taenia asiatica (PRJNA299871) (Taenia asiatica strain TASYD01) | 60 | 150 | 2 | 5 | 2.5 | 1 | 1 | 1.0 | 2.5 | ||
| Taenia multiceps (PRJNA307624) (Taenia multiceps strain Gns01) | 233 | 807 | 2 | 55 | 3.5 | 1 | 1 | 1.0 | 3.5 | ||
| Hydatigera taeniaeformis (PRJEB534) (Hydatigera taeniaeformis strain Spain/Canary Islands) | 93 | 224 | 2 | 7 | 2.4 | 1 | 1 | 1.0 | 2.4 | ||
| Echinococcus | 451 | 1597 | 2 | 44 | 3.5 | 2 | 5 | 3.2 | 1.1 | ||
| Echinococcus | 2045 | 5145 | 2 | 29 | 2.5 | 2 | 4 | 2.2 | 1.1 | ||
| Echinococcus | 169 | 468 | 2 | 21 | 2.8 | 2 | 3 | 2.1 | 1.3 | ||
| Echinococcus granulosus | 43 | 114 | 2 | 7 | 2.7 | 2 | 2 | 2.0 | 1.3 | ||
| Echinococcus granulosus (PRJNA182977) (Echinococcus granulosus strain G1) | 41 | 92 | 2 | 5 | 2.2 | 1 | 1 | 1.0 | 2.2 | ||
| Echinococcus granulosus (PRJEB121) (Echinococcus granulosus strain G1) | 11 | 22 | 2 | 2 | 2.0 | 1 | 1 | 1.0 | 2.0 | ||
| Echinococcus multilocularis (PRJEB122) (Echinococcus multilocularis strain Java) | 26 | 91 | 2 | 11 | 3.5 | 1 | 1 | 1.0 | 3.5 | ||
| Echinococcus canadensis (PRJEB8992) (Echinococcus canadensis) | 26 | 95 | 2 | 10 | 3.7 | 1 | 1 | 1.0 | 3.7 | ||
| Hymenolepididae | 526 | 1947 | 2 | 31 | 3.7 | 2 | 3 | 2.6 | 1.4 | ||
| Hymenolepis diminuta (PRJEB30942) (Hymenolepis diminuta strain laboratory inbred isolate) | 569 | 3150 | 2 | 57 | 5.5 | 1 | 1 | 1.0 | 5.5 | ||
| Hymenolepididae | 171 | 719 | 2 | 46 | 4.2 | 2 | 2 | 2.0 | 2.1 | ||
| Hymenolepis microstoma (PRJEB124) (Hymenolepis microstoma) | 133 | 380 | 2 | 10 | 2.9 | 1 | 1 | 1.0 | 2.9 | ||
| Hymenolepis nana (PRJEB508) (Rodentolepis nana strain Japan) | 182 | 785 | 2 | 46 | 4.3 | 1 | 1 | 1.0 | 4.3 | ||
| Diphyllobothriidae | 3367 | 14406 | 2 | 51 | 4.3 | 2 | 3 | 2.4 | 1.8 | ||
| Diphyllobothriidae | 1060 | 4891 | 2 | 49 | 4.6 | 2 | 2 | 2.0 | 2.3 | ||
| Spirometra erinaceieuropaei (PRJEB1202) (Spirometra erinaceieuropaei) | 2273 | 6286 | 2 | 39 | 2.8 | 1 | 1 | 1.0 | 2.8 | ||
| Schistocephalus solidus (PRJEB527) (Schistocephalus solidus strain NST_G2) | 399 | 2328 | 2 | 49 | 5.8 | 1 | 1 | 1.0 | 5.8 | ||
| Dibothriocephalus latus (PRJEB1206) (Dibothriocephalus latus) | 225 | 656 | 2 | 21 | 2.9 | 1 | 1 | 1.0 | 2.9 | ||
| Eumetazoa | 51 | 159 | 2 | 18 | 3.1 | 2 | 2 | 2.0 | 1.6 | ||
| Nematostella vectensis (Nematostella vectensis strain CH2 x CH6) | 810 | 2628 | 2 | 25 | 3.2 | 1 | 1 | 1.0 | 3.2 | ||
| Trichoplax adhaerens (Trichoplax adhaerens strain Grell-BS-1999) | 167 | 692 | 2 | 115 | 4.1 | 1 | 1 | 1.0 | 4.1 |
