Steinernema feltiae - public RNASeq studies
Table of Contents
- Comparative genomics of Steinernema reveals deeply conserved gene regulatory networks
- Comparative transcriptomics of Steinernema and Caenorhabditis single embryos reveals gene expression divergence during early embryogenesis
- A core set of venom proteins are secreted by entomopathogenic nematodes in the genus Steinernema
Analysed
SRP058023: Comparative genomics of Steinernema reveals deeply conserved gene regulatory networks
University of California, Irvine
Design: 4 conditions
| Condition | num. replicates | Developmental stage |
|---|---|---|
| RNA IJ | 2 | RNA IJ |
| RNA L1 | 2 | RNA L1 |
| RNA embryo | 2 | RNA embryo |
| RNA young adult | 2 | RNA young adult |
SRP084244: Comparative transcriptomics of Steinernema and Caenorhabditis single embryos reveals gene expression divergence during early embryogenesis
University of California, Irvine
Design: 11 conditions
| Condition | num. replicates | Developmental stage |
|---|---|---|
| 1.5-fold | 4 | 1.5-fold |
| 2-cell | 4 | 2-cell |
| 2-fold | 4 | 2-fold |
| 24-44-cell | 4 | 24-44-cell |
| 4-cell | 4 | 4-cell |
| 64-78-cell | 4 | 64-78-cell |
| 8-cell | 4 | 8-cell |
| L1 | 4 | L1 |
| comma | 4 | comma |
| moving | 4 | moving |
| zygote | 4 | zygote |
SRP159122: A core set of venom proteins are secreted by entomopathogenic nematodes in the genus Steinernema
University of California Irvine
Design: 9 conditions
| Condition | num. replicates | Developmental stage | Organism part | Strain | Timepoint | Treatment |
|---|---|---|---|---|---|---|
| Infective Juvenile | 3 | Infective Juvenile (IJ) | whole organism | SN | ||
| activated in a live waxworm, 12 hours | 3 | Infective Juvenile (IJ) | whole organism | SN | 12hr | activated in a live waxworm |
| activated in a live waxworm, 15 hours | 3 | Infective Juvenile (IJ) | whole organism | SN | 15hr | activated in a live waxworm |
| activated in a live waxworm, 3 hours | 3 | Infective Juvenile (IJ) | whole organism | SN | 3hr | activated in a live waxworm |
| activated in a live waxworm, 6 hours | 3 | Infective Juvenile (IJ) | whole organism | SN | 6hr | activated in a live waxworm |
| activated in a live waxworm, 9 hours | 3 | Infective Juvenile (IJ) | whole organism | SN | 9hr | activated in a live waxworm |
| activated in waxworm homogenate, 3 hours | 3 | Infective Juvenile (IJ) | whole organism | SN | 3hr | activated in waxworm homogenate |
| activated in waxworm homogenate, 6 hours | 3 | Infective Juvenile (IJ) | whole organism | SN | 6hr | activated in waxworm homogenate |
| activated in waxworm homogenate, 9 hours | 3 | Infective Juvenile (IJ) | whole organism | SN | 9hr | activated in waxworm homogenate |
Release 18 - April 2023
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