# # Study SRP113706: Ageing in Macrostomum lignano # See Mouton .. Berezikov, 2018: https://www.ncbi.nlm.nih.gov/pubmed/29488325 # Reads aligned with TopHat2 and quantified with HTSeq2, by RNASeq-er: https://www.ebi.ac.uk/fg/rnaseq/api # # Differential expression analysis, comparing pairs of conditions differing by treatment # Using R version 4.1.3, DESeq2 version 1.34.0 # Values are base 2 logarithm of maximum likelihood estimate of fold change and adjusted p-value by Wald test per gene for each contrast # Values rounded to 2.s.f., filtered past a significance threshold of adj_pval < 0.05 and abs(log2fc) > 0.5 # No differentially expressed genes found in contrast 10 months: multiple-cut vs once-cut # No differentially expressed genes found in contrast 12 months: multiple-cut vs once-cut # No differentially expressed genes found in contrast 26 months: multiple-cut vs once-cut # No differentially expressed genes found in contrast 26 months: non-cut vs once-cut # No differentially expressed genes found in contrast 6 months: multiple-cut vs non-cut # No differentially expressed genes found in contrast 6 months: multiple-cut vs once-cut gene_id 10 months: multiple-cut vs non-cut 10 months: non-cut vs once-cut 12 months: multiple-cut vs non-cut 12 months: non-cut vs once-cut 26 months: multiple-cut vs non-cut 4 months: non-cut vs once-cut 6 months: non-cut vs once-cut BOX15_Mlig000013g3 -0.87 4.0e-02 BOX15_Mlig000040g4 -0.90 7.2e-04 BOX15_Mlig000053g1 2.00 3.5e-02 BOX15_Mlig000093g2 0.77 2.0e-02 -0.86 2.6e-03 BOX15_Mlig000093g4 0.90 3.8e-04 -0.70 0.03700 -0.80 1.7e-03 BOX15_Mlig000102g1 0.71 2.1e-02 -0.78 2.3e-02 BOX15_Mlig000102g4 0.91 4.7e-05 0.69 1.3e-02 -0.85 7.0e-04 BOX15_Mlig000138g1 -1.60 2.3e-02 BOX15_Mlig000166g2 1.00 1.1e-02 BOX15_Mlig000313g1 0.68 4.6e-02 BOX15_Mlig000320g1 -1.00 3.3e-02 BOX15_Mlig000382g3 0.94 4.1e-02 BOX15_Mlig000473g1 -0.67 9.6e-04 BOX15_Mlig000497g2 0.89 8.0e-03 -1.10 2.2e-04 BOX15_Mlig000509g1 0.90 2.4e-03 -0.77 9.2e-03 BOX15_Mlig000536g2 -0.73 9.0e-03 0.69 9.4e-03 BOX15_Mlig000607g2 0.84 1.2e-02 -0.82 1.0e-02 BOX15_Mlig000607g4 0.66 3.2e-02 BOX15_Mlig000774g1 0.77 3.9e-02 BOX15_Mlig000798g1 -1.30 2.5e-02 BOX15_Mlig000873g2 -0.85 4.4e-02 BOX15_Mlig000885g3 -0.88 1.9e-02 BOX15_Mlig000890g4 -0.72 3.8e-02 BOX15_Mlig000913g1 0.71 4.8e-02 BOX15_Mlig000913g3 0.57 5.0e-02 -0.64 9.8e-03 BOX15_Mlig000960g1 -1.50 1.3e-03 BOX15_Mlig000997g1 -0.72 4.1e-02 BOX15_Mlig001014g2 -1.30 9.9e-04 BOX15_Mlig001155g2 0.81 1.1e-03 0.65 4.1e-02 -0.63 1.3e-02 BOX15_Mlig001174g1 -0.58 6.6e-04 BOX15_Mlig001257g3 0.56 3.3e-03 BOX15_Mlig001342g1 -0.67 3.7e-02 BOX15_Mlig001346g3 -0.66 1.9e-02 BOX15_Mlig001366g1 1.20 2.3e-03 BOX15_Mlig001366g4 0.58 1.9e-03 -0.58 1.8e-03 BOX15_Mlig001414g4 -0.85 3.9e-03 BOX15_Mlig001455g1 0.63 3.2e-02 BOX15_Mlig001506g19 0.65 3.9e-04 -0.65 1.8e-03 BOX15_Mlig001517g1 0.86 1.3e-03 -0.78 9.4e-04 BOX15_Mlig001517g6 0.60 4.5e-02 -0.60 1.3e-02 BOX15_Mlig001535g1 0.85 1.5e-03 0.71 4.3e-02 BOX15_Mlig001535g3 0.65 3.6e-02 0.79 1.9e-02 BOX15_Mlig001535g4 0.51 2.1e-03 -0.51 2.1e-03 BOX15_Mlig001535g5 0.58 5.5e-04 -0.51 1.1e-02 BOX15_Mlig001594g1 0.75 1.8e-02 BOX15_Mlig001624g1 -0.91 4.3e-02 BOX15_Mlig001629g2 -0.94 2.0e-02 0.97 1.3e-02 BOX15_Mlig001643g1 0.78 3.9e-02 BOX15_Mlig001649g2 0.77 8.2e-04 -0.77 9.6e-04 BOX15_Mlig001655g1 -1.00 2.9e-03 BOX15_Mlig001695g5 0.69 2.9e-02 BOX15_Mlig001768g1 0.74 1.1e-02 BOX15_Mlig001779g12 6.40 7.7e-06 BOX15_Mlig001897g1 1.00 1.8e-03 -0.74 3.5e-02 BOX15_Mlig001965g3 0.63 1.5e-03 -0.71 9.0e-05 BOX15_Mlig001965g5 -0.73 9.6e-04 -0.62 0.02000 BOX15_Mlig001996g2 -1.00 2.6e-02 BOX15_Mlig002011g1 0.66 1.1e-02 BOX15_Mlig002026g6 -0.80 4.1e-02 BOX15_Mlig002084g3 -0.85 4.7e-02 BOX15_Mlig002118g1 2.30 1.8e-03 BOX15_Mlig002166g3 1.50 1.4e-04 BOX15_Mlig002304g1 0.74 8.5e-03 BOX15_Mlig002359g1 0.60 2.3e-02 -0.63 7.2e-03 -0.62 0.02700 BOX15_Mlig002400g1 0.60 0.02000 BOX15_Mlig002413g1 0.97 2.9e-02 -0.84 1.3e-02 BOX15_Mlig002694g1 0.76 5.0e-02 BOX15_Mlig002788g1 1.20 3.5e-03 BOX15_Mlig002807g1 -0.81 4.6e-02 BOX15_Mlig002819g1 0.61 4.6e-02 -0.67 1.7e-02 BOX15_Mlig002821g1 1.20 1.2e-02 BOX15_Mlig002821g2 -0.65 3.9e-02 -0.60 2.3e-02 BOX15_Mlig002821g3 0.59 1.7e-02 0.65 2.1e-02 -0.65 1.7e-02 BOX15_Mlig002888g1 -0.74 1.2e-02 BOX15_Mlig002888g2 -0.75 9.9e-04 BOX15_Mlig002912g8 0.82 5.7e-03 -0.59 4.6e-02 BOX15_Mlig002920g1 -0.77 2.0e-02 BOX15_Mlig002939g3 0.54 8.5e-03 -0.57 2.2e-03 BOX15_Mlig002959g1 -1.00 1.6e-04 BOX15_Mlig002997g1 1.30 1.4e-02 BOX15_Mlig003007g4 -0.77 3.3e-02 BOX15_Mlig003010g1 0.62 6.3e-04 0.51 2.4e-02 BOX15_Mlig003014g1 -0.84 3.2e-02 BOX15_Mlig003164g1 -0.71 1.3e-02 BOX15_Mlig003244g1 -0.71 2.2e-02 BOX15_Mlig003258g1 0.75 2.9e-03 -0.71 3.0e-03 BOX15_Mlig003299g1 0.99 1.7e-02 BOX15_Mlig003309g2 1.20 2.3e-04 BOX15_Mlig003348g1 0.59 1.1e-03 -0.52 5.3e-03 BOX15_Mlig003361g1 0.80 2.8e-06 0.55 1.1e-02 -0.73 1.0e-04 -0.72 3.7e-05 BOX15_Mlig003382g2 -0.91 1.7e-02 -0.68 2.3e-02 BOX15_Mlig003403g1 -0.95 3.3e-02 BOX15_Mlig003434g2 -1.10 2.5e-02 BOX15_Mlig003525g1 0.52 3.4e-02 -0.50 3.2e-02 BOX15_Mlig003533g2 -0.51 2.9e-02 BOX15_Mlig003555g1 -0.62 4.8e-02 0.56 3.7e-02 BOX15_Mlig003562g1 -1.10 5.8e-03 BOX15_Mlig003601g1 0.88 2.7e-04 BOX15_Mlig003657g1 0.81 9.4e-03 BOX15_Mlig003657g2 -0.66 6.9e-03 BOX15_Mlig003703g1 0.57 1.5e-03 -0.57 4.3e-04 BOX15_Mlig003703g2 0.64 1.7e-02 0.74 1.8e-02 -0.62 1.1e-02 BOX15_Mlig003729g1 0.93 3.9e-02 BOX15_Mlig003831g1 0.75 1.5e-02 0.72 4.4e-02 BOX15_Mlig003871g1 0.61 3.8e-02 BOX15_Mlig003912g2 -0.66 4.2e-02 BOX15_Mlig004004g1 0.93 1.6e-03 -0.83 4.0e-02 -0.69 2.1e-02 BOX15_Mlig004004g3 0.98 2.1e-04 -0.82 9.6e-04 BOX15_Mlig004040g1 -0.92 1.5e-02 BOX15_Mlig004090g1 -0.88 4.6e-02 BOX15_Mlig004092g1 -0.80 4.8e-02 BOX15_Mlig004133g1 0.83 3.8e-04 0.69 2.4e-02 -0.82 2.9e-03 -0.74 1.5e-03 BOX15_Mlig004133g3 0.86 7.9e-05 -0.68 0.01500 -0.60 2.9e-02 -0.71 1.2e-03 BOX15_Mlig004157g1 0.75 9.0e-04 0.72 1.9e-02 -0.64 4.0e-02 -0.72 4.9e-04 BOX15_Mlig004171g1 0.79 1.6e-05 -0.53 0.03000 0.57 1.6e-02 -0.64 8.6e-04 BOX15_Mlig004289g3 0.74 9.7e-03 -0.75 4.0e-03 BOX15_Mlig004297g1 0.63 1.7e-02 BOX15_Mlig004316g1 0.93 1.9e-02 BOX15_Mlig004405g1 0.77 1.6e-03 -0.66 2.7e-02 BOX15_Mlig004406g1 -0.87 1.2e-02 BOX15_Mlig004474g2 1.20 7.4e-05 BOX15_Mlig004514g1 0.90 2.1e-04 -0.79 0.01500 BOX15_Mlig004562g1 0.65 1.8e-02 -0.56 4.1e-02 -0.62 2.0e-03 BOX15_Mlig004643g2 0.76 1.3e-02 BOX15_Mlig004666g1 0.61 1.7e-02 -0.58 1.8e-02 BOX15_Mlig004705g1 0.71 2.8e-03 -0.80 2.7e-04 BOX15_Mlig004715g1 0.81 4.6e-02 -0.89 1.5e-02 BOX15_Mlig004803g7 -0.64 1.6e-03 BOX15_Mlig004811g1 0.87 2.3e-03 BOX15_Mlig004821g1 -0.82 2.5e-02 -0.75 1.4e-02 BOX15_Mlig004821g2 0.86 1.3e-04 0.77 1.1e-02 -0.89 9.9e-04 -0.57 2.3e-02 BOX15_Mlig004821g3 0.86 9.4e-04 0.82 2.0e-02 -1.00 9.0e-04 -0.57 4.9e-02 BOX15_Mlig004854g8 0.68 0.00710 BOX15_Mlig004871g1 0.69 1.6e-02 -0.68 5.8e-03 BOX15_Mlig004883g1 0.80 3.0e-02 -0.79 1.7e-02 BOX15_Mlig004920g1 0.52 5.0e-02 BOX15_Mlig005029g1 0.79 4.2e-02 BOX15_Mlig005059g1 -1.00 2.2e-02 BOX15_Mlig005059g3 0.78 1.7e-02 BOX15_Mlig005088g1 0.55 1.1e-03 BOX15_Mlig005160g1 -0.70 4.8e-02 BOX15_Mlig005171g1 -0.67 3.7e-02 BOX15_Mlig005243g1 -0.71 1.1e-02 BOX15_Mlig005246g3 0.71 6.2e-05 -0.51 1.7e-02 -0.73 2.6e-05 BOX15_Mlig005306g4 1.00 6.5e-03 -0.85 1.5e-02 BOX15_Mlig005381g2 -0.86 1.5e-03 BOX15_Mlig005394g1 -0.68 2.2e-02 BOX15_Mlig005397g1 0.84 9.0e-03 BOX15_Mlig005397g2 0.84 1.6e-03 BOX15_Mlig005410g2 0.98 6.3e-03 BOX15_Mlig005410g3 1.20 9.6e-04 BOX15_Mlig005441g1 0.69 0.00560 BOX15_Mlig005507g1 -0.94 2.7e-02 BOX15_Mlig005530g1 0.79 4.6e-02 BOX15_Mlig005541g1 1.20 2.7e-03 BOX15_Mlig005554g1 0.70 5.9e-03 -0.62 4.7e-02 -0.62 1.2e-02 BOX15_Mlig005554g2 0.75 1.5e-03 -0.73 1.3e-03 BOX15_Mlig005562g1 0.68 2.0e-05 0.50 1.6e-02 BOX15_Mlig005595g1 0.87 2.8e-02 BOX15_Mlig005596g3 1.00 1.0e-02 BOX15_Mlig005607g1 1.20 6.6e-03 BOX15_Mlig005614g1 -0.58 2.1e-02 BOX15_Mlig005629g1 -1.40 6.5e-03 BOX15_Mlig005660g2 1.00 4.1e-02 BOX15_Mlig005678g1 -1.80 8.9e-03 BOX15_Mlig005710g1 -0.63 3.2e-02 BOX15_Mlig005816g1 0.69 6.9e-03 -0.63 6.9e-03 BOX15_Mlig005931g1 0.52 2.0e-02 0.63 1.9e-02 -0.90 1.0e-04 -0.81 2.3e-05 BOX15_Mlig005947g2 -0.87 0.03900 BOX15_Mlig005951g3 0.82 7.5e-04 0.72 2.0e-02 -0.68 2.7e-02 BOX15_Mlig006006g1 -0.81 1.5e-02 BOX15_Mlig006006g2 -0.91 7.4e-05 0.89 5.4e-05 BOX15_Mlig006043g1 -1.30 1.8e-04 BOX15_Mlig006090g4 -0.61 6.9e-03 BOX15_Mlig006090g7 0.82 2.1e-07 0.51 1.3e-02 -0.51 8.8e-03 -0.83 8.2e-08 BOX15_Mlig006173g2 0.79 4.8e-02 -0.94 4.5e-03 BOX15_Mlig006181g1 0.61 2.3e-02 -0.63 2.5e-02 BOX15_Mlig006283g2 -0.70 6.1e-03 -0.54 2.9e-02 BOX15_Mlig006283g3 0.62 1.7e-02 0.72 1.3e-02 -0.82 1.5e-03 -0.61 1.7e-02 BOX15_Mlig006283g5 1.00 6.8e-05 0.67 4.0e-02 -0.65 3.9e-02 BOX15_Mlig006290g2 0.71 2.2e-02 -0.61 4.6e-02 BOX15_Mlig006357g1 0.86 2.9e-02 BOX15_Mlig006396g1 1.00 1.3e-05 0.64 3.1e-02 -0.74 6.3e-03 -0.60 0.04700 BOX15_Mlig006442g1 0.52 3.1e-02 BOX15_Mlig006445g1 0.69 3.0e-02 BOX15_Mlig006448g1 0.79 4.2e-02 -0.59 4.7e-02 BOX15_Mlig006485g1 1.00 1.7e-04 -0.80 2.9e-03 BOX15_Mlig006537g3 0.76 3.1e-02 -0.72 1.3e-02 BOX15_Mlig006650g1 0.72 3.4e-02 BOX15_Mlig006668g1 2.20 2.6e-02 -2.70 0.00710 BOX15_Mlig006689g1 1.00 2.0e-02 -0.94 2.7e-02 -0.64 4.9e-02 BOX15_Mlig006715g1 0.76 9.2e-03 BOX15_Mlig006741g2 0.73 3.0e-02 BOX15_Mlig006795g2 0.70 3.8e-02 0.82 2.2e-02 -0.65 3.2e-02 BOX15_Mlig006839g1 0.73 4.4e-04 0.67 1.0e-02 -0.50 1.5e-02 BOX15_Mlig006845g1 1.20 1.5e-04 BOX15_Mlig006862g1 0.51 9.0e-03 0.52 2.2e-02 BOX15_Mlig006882g1 0.56 4.2e-03 BOX15_Mlig006906g1 -0.62 1.5e-02 BOX15_Mlig006908g1 1.30 1.5e-03 BOX15_Mlig006955g1 -0.72 4.0e-02 BOX15_Mlig006955g2 0.99 3.4e-02 BOX15_Mlig006955g3 -0.61 1.8e-02 BOX15_Mlig007001g1 0.82 2.6e-05 -0.78 0.00057 0.59 2.1e-02 -0.56 2.6e-02 -0.67 1.5e-04 BOX15_Mlig007002g3 -0.93 4.4e-02 BOX15_Mlig007057g1 0.66 6.3e-03 BOX15_Mlig007147g2 1.20 8.7e-03 BOX15_Mlig007182g2 -0.61 1.0e-02 BOX15_Mlig007186g2 -0.66 4.3e-02 BOX15_Mlig007235g3 -0.58 2.7e-02 BOX15_Mlig007250g1 0.85 2.4e-02 BOX15_Mlig007257g1 0.61 3.2e-02 BOX15_Mlig007309g1 0.53 2.2e-02 BOX15_Mlig007316g1 -0.87 9.6e-03 BOX15_Mlig007331g1 -0.71 1.6e-02 BOX15_Mlig007379g1 0.73 3.2e-02 BOX15_Mlig007446g1 0.71 1.2e-03 -0.62 4.0e-03 BOX15_Mlig007504g1 1.10 4.5e-04 0.79 4.8e-02 BOX15_Mlig007504g2 0.80 3.9e-04 -0.68 2.1e-02 -0.70 1.5e-03 BOX15_Mlig007504g4 0.62 9.7e-03 0.65 2.9e-02 -0.91 1.7e-05 BOX15_Mlig007526g1 -0.66 4.0e-03 BOX15_Mlig007526g2 -0.64 2.2e-02 BOX15_Mlig007526g3 0.54 1.6e-02 -0.65 9.9e-04 BOX15_Mlig007609g1 0.85 4.2e-02 BOX15_Mlig007613g1 0.64 2.3e-02 BOX15_Mlig007621g1 -1.20 2.0e-02 BOX15_Mlig007636g1 -0.72 4.6e-02 BOX15_Mlig007666g2 0.71 2.6e-02 BOX15_Mlig007700g1 -0.53 2.5e-02 BOX15_Mlig007793g1 -0.75 1.1e-02 BOX15_Mlig007848g1 -0.79 2.6e-02 BOX15_Mlig007880g2 -0.60 4.9e-02 BOX15_Mlig007907g1 0.60 3.4e-02 BOX15_Mlig007978g1 0.79 1.2e-02 BOX15_Mlig007978g2 0.93 1.6e-04 -0.66 9.7e-03 BOX15_Mlig007978g3 0.81 1.4e-02 -0.77 1.3e-02 BOX15_Mlig007986g1 0.83 2.4e-02 -0.76 3.0e-02 BOX15_Mlig008074g4 0.64 3.5e-02 BOX15_Mlig008093g1 -0.94 4.2e-02 BOX15_Mlig008117g1 1.40 2.3e-02 BOX15_Mlig008135g3 -0.71 1.2e-02 BOX15_Mlig008195g1 0.67 2.9e-02 BOX15_Mlig008214g1 0.73 4.9e-02 -0.80 2.9e-03 BOX15_Mlig008217g3 1.20 2.1e-02 BOX15_Mlig008287g2 -0.75 4.6e-02 BOX15_Mlig008300g1 1.20 3.0e-04 BOX15_Mlig008364g7 -1.00 1.1e-02 BOX15_Mlig008398g1 -1.10 9.9e-03 BOX15_Mlig008414g1 0.74 1.2e-02 BOX15_Mlig008414g2 0.50 7.8e-03 0.54 1.6e-02 -0.56 8.8e-03 BOX15_Mlig008421g1 1.20 1.6e-02 BOX15_Mlig008434g2 -0.89 4.0e-02 BOX15_Mlig008469g1 0.89 9.3e-05 0.86 1.5e-03 -0.68 1.3e-02 -0.60 1.7e-02 BOX15_Mlig008480g1 0.93 9.8e-03 BOX15_Mlig008482g1 0.57 1.2e-03 0.57 6.9e-03 -0.63 9.0e-04 BOX15_Mlig008495g1 0.86 1.4e-02 BOX15_Mlig008515g1 0.75 1.8e-02 -0.83 2.9e-03 BOX15_Mlig008556g1 -0.55 1.3e-02 BOX15_Mlig008577g1 -0.76 5.8e-03 BOX15_Mlig008635g1 0.52 4.2e-02 -0.53 2.1e-02 BOX15_Mlig008636g1 0.61 3.7e-02 BOX15_Mlig008682g1 -0.73 7.6e-03 BOX15_Mlig008682g2 -0.52 2.2e-02 BOX15_Mlig008711g1 -0.54 2.3e-02 BOX15_Mlig008852g1 1.00 3.1e-03 -1.00 2.2e-02 BOX15_Mlig008852g3 -0.64 2.1e-02 BOX15_Mlig008854g1 -0.71 4.7e-02 BOX15_Mlig008875g1 0.61 3.4e-03 BOX15_Mlig008942g1 -0.74 2.5e-02 BOX15_Mlig008953g1 0.66 1.1e-03 0.76 2.7e-03 -0.84 2.0e-04 -0.67 4.9e-04 BOX15_Mlig008957g1 -1.00 1.8e-02 BOX15_Mlig008966g1 -0.87 2.1e-02 BOX15_Mlig008987g1 0.96 4.3e-02 -0.94 4.1e-02 BOX15_Mlig008987g2 -0.73 1.5e-02 BOX15_Mlig008987g3 0.78 2.5e-02 BOX15_Mlig009022g2 -0.62 4.6e-02 BOX15_Mlig009033g1 -0.51 4.2e-02 BOX15_Mlig009067g1 -0.71 2.1e-03 BOX15_Mlig009102g4 0.60 2.4e-02 -0.56 2.7e-02 BOX15_Mlig009114g3 1.40 1.4e-02 BOX15_Mlig009134g1 0.60 2.1e-04 BOX15_Mlig009159g1 -0.73 1.1e-04 0.60 0.01500 -0.70 1.7e-03 BOX15_Mlig009159g3 -0.55 2.5e-02 -0.72 6.4e-03 BOX15_Mlig009208g1 0.87 1.1e-02 -0.91 1.7e-02 BOX15_Mlig009209g1 -0.92 1.6e-02 0.86 2.4e-02 BOX15_Mlig009209g2 0.83 1.4e-02 0.90 7.1e-04 BOX15_Mlig009246g1 -0.76 4.2e-02 BOX15_Mlig009246g3 1.10 1.2e-04 BOX15_Mlig009263g1 -0.68 1.1e-02 BOX15_Mlig009263g2 1.10 1.7e-02 BOX15_Mlig009263g3 0.64 1.6e-02 -0.66 4.7e-03 BOX15_Mlig009278g1 0.81 9.8e-03 -0.66 2.2e-02 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BOX15_Mlig020382g2 -0.53 4.0e-02 BOX15_Mlig020390g1 0.61 2.5e-02 BOX15_Mlig020397g1 -0.58 2.5e-03 BOX15_Mlig020438g1 0.72 1.2e-02 -0.72 3.9e-02 BOX15_Mlig020472g3 0.99 1.6e-02 BOX15_Mlig020544g1 -0.83 2.1e-02 BOX15_Mlig020553g1 -1.10 4.4e-02 BOX15_Mlig020603g2 -0.70 4.4e-02 BOX15_Mlig020625g1 0.55 6.4e-03 BOX15_Mlig020688g1 1.00 6.3e-03 BOX15_Mlig020751g3 -0.66 2.9e-02 BOX15_Mlig020757g1 -0.82 1.1e-02 BOX15_Mlig020775g1 0.85 1.3e-05 0.63 2.4e-02 -0.82 8.5e-04 -0.51 1.4e-02 BOX15_Mlig020811g2 0.68 2.2e-02 BOX15_Mlig020836g1 0.68 2.1e-07 -0.57 2.3e-05 BOX15_Mlig020908g1 0.80 2.7e-02 BOX15_Mlig020928g1 0.81 9.5e-04 -0.89 1.2e-04 BOX15_Mlig020928g2 1.00 2.2e-03 BOX15_Mlig020928g3 0.71 4.4e-03 -0.73 1.0e-02 -0.71 3.5e-03 BOX15_Mlig020938g1 -0.64 0.04500 BOX15_Mlig020950g1 0.91 1.2e-04 -0.64 9.1e-03 BOX15_Mlig020950g2 0.75 3.4e-03 -0.74 1.3e-02 -0.58 3.5e-02 BOX15_Mlig021123g1 0.68 2.3e-02 -0.66 1.9e-02 BOX15_Mlig021123g3 0.53 4.3e-02 -0.56 2.6e-02 BOX15_Mlig021126g1 1.10 0.04900 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BOX15_Mlig022212g6 0.74 8.8e-05 -0.61 1.2e-03 BOX15_Mlig022217g3 0.92 3.2e-02 BOX15_Mlig022219g1 0.77 7.2e-04 -0.59 1.0e-02 BOX15_Mlig022272g1 0.90 4.6e-02 BOX15_Mlig022275g1 0.92 2.1e-04 -0.68 7.6e-03 BOX15_Mlig022284g1 -0.56 3.6e-02 BOX15_Mlig022324g1 -0.51 3.3e-02 BOX15_Mlig022324g2 0.56 1.8e-02 BOX15_Mlig022356g1 -1.90 3.4e-03 BOX15_Mlig022382g1 0.77 4.0e-02 BOX15_Mlig022398g1 -0.59 4.6e-02 BOX15_Mlig022412g1 -0.70 2.3e-02 BOX15_Mlig022436g4 -0.83 3.0e-02 BOX15_Mlig022439g1 0.83 2.5e-02 BOX15_Mlig022455g1 0.62 2.2e-02 BOX15_Mlig022581g1 -0.54 2.1e-02 BOX15_Mlig022585g1 1.10 3.8e-02 BOX15_Mlig022628g1 1.00 5.3e-03 BOX15_Mlig022671g2 1.10 8.1e-03 -0.90 2.2e-02 BOX15_Mlig022683g1 0.66 2.8e-02 BOX15_Mlig022690g1 0.52 3.8e-03 -0.54 2.2e-03 BOX15_Mlig022690g2 0.70 2.9e-02 BOX15_Mlig022690g3 0.74 3.1e-02 BOX15_Mlig022691g1 1.00 2.4e-03 BOX15_Mlig022732g1 0.57 1.0e-02 BOX15_Mlig022742g1 3.10 2.7e-02 BOX15_Mlig022748g1 0.67 1.4e-03 BOX15_Mlig022752g2 0.77 1.3e-02 BOX15_Mlig022770g2 0.63 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3.5e-03 BOX15_Mlig023177g1 0.83 3.0e-03 -0.77 2.9e-03 BOX15_Mlig023213g1 0.69 8.1e-03 0.75 1.5e-02 -0.81 4.2e-03 -1.10 1.3e-06 BOX15_Mlig023247g1 -0.64 2.0e-02 BOX15_Mlig023313g3 -0.97 1.2e-02 BOX15_Mlig023348g1 1.00 2.9e-02 BOX15_Mlig023355g2 -0.63 1.8e-02 BOX15_Mlig023420g1 -0.59 3.0e-02 BOX15_Mlig023451g5 0.86 2.8e-02 BOX15_Mlig023503g3 0.82 4.2e-02 BOX15_Mlig023574g2 1.00 1.1e-03 BOX15_Mlig023720g2 -0.71 5.0e-02 BOX15_Mlig023739g1 0.73 2.9e-05 -0.60 0.00730 -0.65 1.4e-04 BOX15_Mlig023740g2 -0.65 2.0e-02 BOX15_Mlig023767g1 0.94 2.3e-04 BOX15_Mlig023775g1 -0.86 1.6e-02 BOX15_Mlig023786g1 0.82 3.0e-02 BOX15_Mlig023872g1 -0.69 3.2e-02 BOX15_Mlig023921g1 0.85 8.1e-05 -0.72 3.8e-03 -0.64 6.0e-03 BOX15_Mlig023921g2 0.79 1.2e-04 0.68 9.0e-03 -0.75 1.2e-03 -0.69 9.6e-04 BOX15_Mlig023977g1 0.53 3.8e-02 BOX15_Mlig023986g1 -0.84 1.3e-02 BOX15_Mlig024047g3 -0.59 2.0e-02 BOX15_Mlig024051g1 -0.99 2.9e-03 BOX15_Mlig024056g1 -0.57 3.4e-02 BOX15_Mlig024056g2 0.65 2.8e-02 BOX15_Mlig024063g1 0.77 5.1e-04 0.74 1.3e-02 -0.62 4.0e-02 BOX15_Mlig024102g3 0.65 2.9e-03 -0.61 3.0e-03 BOX15_Mlig024240g1 -0.88 2.0e-03 BOX15_Mlig024309g1 0.73 9.3e-03 -0.77 1.2e-02 -0.78 4.2e-03 BOX15_Mlig024314g1 -1.00 1.9e-02 BOX15_Mlig024314g2 0.93 3.2e-02 BOX15_Mlig024341g1 -0.63 2.2e-03 BOX15_Mlig024347g2 0.95 1.0e-03 BOX15_Mlig024446g1 0.70 2.1e-02 0.90 2.4e-02 -1.00 4.3e-03 -0.73 7.3e-03 BOX15_Mlig024489g1 0.90 3.2e-02 BOX15_Mlig024536g3 0.95 3.7e-02 BOX15_Mlig024559g3 0.88 2.1e-03 BOX15_Mlig024559g5 0.66 4.0e-04 -0.58 3.5e-03 BOX15_Mlig024563g3 0.93 2.0e-02 -0.90 8.1e-03 BOX15_Mlig024572g1 -0.94 5.3e-03 BOX15_Mlig024610g1 0.64 2.0e-03 -0.63 9.8e-03 -0.61 2.7e-03 BOX15_Mlig024617g1 0.67 1.2e-03 BOX15_Mlig024686g1 -0.54 3.2e-02 BOX15_Mlig024702g1 0.93 1.3e-02 BOX15_Mlig024710g1 -0.82 4.7e-02 BOX15_Mlig024710g2 -0.61 2.0e-02 BOX15_Mlig024849g2 -0.98 2.9e-02 BOX15_Mlig024863g1 0.97 2.6e-05 -0.66 0.02700 0.68 1.8e-02 -0.77 3.3e-03 -1.20 8.2e-08 BOX15_Mlig024884g3 0.96 2.5e-02 BOX15_Mlig025005g1 0.70 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-0.61 1.3e-02 BOX15_Mlig032561g1 -0.80 0.03900 BOX15_Mlig032590g1 0.76 1.8e-02 BOX15_Mlig032593g2 -0.90 1.7e-02 BOX15_Mlig032606g1 0.83 1.1e-02 BOX15_Mlig032640g1 0.69 1.1e-02 BOX15_Mlig032775g1 0.88 3.7e-02 BOX15_Mlig032775g2 -1.20 5.3e-04 BOX15_Mlig032851g1 0.87 9.2e-03 -1.10 1.0e-02 BOX15_Mlig032851g6 1.30 4.9e-03 BOX15_Mlig032861g3 0.53 1.7e-02 0.53 4.9e-02 BOX15_Mlig032869g1 1.30 1.1e-02 BOX15_Mlig032869g2 1.00 1.3e-02 -1.10 2.9e-03 BOX15_Mlig032899g1 0.80 3.7e-02 BOX15_Mlig032940g4 0.84 1.7e-02 BOX15_Mlig032947g2 1.20 2.3e-02 BOX15_Mlig032960g1 0.64 8.2e-03 0.59 4.8e-02 -0.74 4.8e-03 -0.65 6.3e-03 BOX15_Mlig032960g2 0.76 2.7e-04 -0.61 1.6e-02 -0.57 1.3e-02 BOX15_Mlig032969g1 0.66 1.4e-02 BOX15_Mlig032993g1 0.69 1.9e-03 -0.59 2.6e-02 -0.83 1.0e-04 BOX15_Mlig033000g1 -0.75 1.3e-02 BOX15_Mlig033008g1 0.87 9.7e-04 BOX15_Mlig033043g1 0.83 2.1e-04 -0.55 2.5e-02 BOX15_Mlig033043g2 0.78 2.5e-04 -0.66 0.01500 -0.73 4.1e-03 -0.71 7.2e-04 BOX15_Mlig033045g1 -0.83 5.3e-03 BOX15_Mlig033054g2 0.54 1.5e-02 BOX15_Mlig033092g1 -0.69 3.9e-02 BOX15_Mlig033104g1 -0.68 1.0e-02 BOX15_Mlig033104g2 0.68 1.9e-02 -0.77 3.2e-03 BOX15_Mlig033118g1 -1.10 2.9e-02 BOX15_Mlig033197g2 0.74 5.2e-05 BOX15_Mlig033232g1 0.78 9.7e-03 -0.85 8.8e-03 -0.71 2.1e-02 BOX15_Mlig033232g2 0.66 2.6e-02 -0.62 2.7e-02 BOX15_Mlig033269g1 -0.94 1.1e-02 1.10 9.9e-04 BOX15_Mlig033303g1 -0.90 3.6e-02 BOX15_Mlig033303g2 1.20 2.2e-02 BOX15_Mlig033303g4 1.20 2.4e-02 -1.10 3.5e-02 BOX15_Mlig033339g1 -0.83 1.2e-02 BOX15_Mlig033351g1 0.93 2.9e-03 -0.72 2.7e-02 BOX15_Mlig033363g1 0.67 2.5e-02 BOX15_Mlig033385g1 0.88 3.8e-03 BOX15_Mlig033396g1 -0.68 9.8e-03 -0.91 1.5e-03 0.68 1.0e-02 BOX15_Mlig033396g2 -0.75 1.1e-02 0.56 4.6e-02 BOX15_Mlig033412g1 0.56 4.0e-02 -0.56 2.4e-02 BOX15_Mlig033443g2 -1.10 1.3e-04 BOX15_Mlig033483g1 -0.94 6.3e-03 BOX15_Mlig033575g1 1.10 1.8e-02 -0.94 4.0e-02 -0.92 4.9e-04 BOX15_Mlig033587g1 0.73 3.8e-02 BOX15_Mlig033614g1 -0.58 4.3e-02 BOX15_Mlig033632g1 0.52 4.3e-02 -0.56 1.9e-02 BOX15_Mlig033644g1 0.52 2.6e-02 BOX15_Mlig033690g1 0.62 2.9e-02 0.71 4.6e-02 -0.71 2.1e-03 BOX15_Mlig033701g1 -1.10 1.7e-02 BOX15_Mlig033701g2 -0.91 3.9e-02 BOX15_Mlig033756g1 0.80 1.7e-02 BOX15_Mlig033756g3 0.68 1.0e-02 0.78 9.0e-03 -0.83 2.0e-03 BOX15_Mlig033764g1 -0.52 4.0e-02 BOX15_Mlig033844g2 1.00 1.0e-02 BOX15_Mlig033860g1 0.76 2.9e-02 BOX15_Mlig033897g1 -0.57 2.1e-02 BOX15_Mlig034007g1 0.60 7.6e-03 BOX15_Mlig034015g3 0.78 1.1e-04 0.61 1.8e-02 -0.79 5.1e-04 -0.63 3.9e-03 BOX15_Mlig034015g4 0.69 1.4e-03 0.67 1.1e-02 -0.74 1.5e-03 -0.50 4.6e-02 BOX15_Mlig034022g1 0.94 4.0e-02 BOX15_Mlig034102g1 -0.55 1.1e-02 BOX15_Mlig034146g3 0.70 4.6e-02 BOX15_Mlig034152g1 0.59 2.1e-02 0.63 4.6e-02 -0.72 1.3e-02 -0.57 1.4e-02 BOX15_Mlig034152g2 0.72 3.8e-02 0.84 4.0e-02 -0.80 4.6e-02 BOX15_Mlig034161g1 -0.68 2.3e-02 BOX15_Mlig034191g2 0.61 2.9e-02 BOX15_Mlig034351g2 0.99 4.7e-03 BOX15_Mlig034380g3 0.61 3.9e-04 -0.53 2.0e-03 BOX15_Mlig034405g1 1.10 3.2e-02 -1.00 3.1e-02 -0.87 2.9e-02 BOX15_Mlig034414g1 -0.66 4.8e-02 BOX15_Mlig034508g3 0.78 5.0e-02 BOX15_Mlig034511g1 0.68 5.0e-02 BOX15_Mlig034542g3 0.73 3.1e-03 -0.70 1.3e-02 -0.58 3.0e-02 BOX15_Mlig034554g2 1.10 3.2e-03 BOX15_Mlig034554g3 -1.00 1.2e-02 -0.74 3.9e-02