Steinernema carpocapsae
BioProject PRJNA202318 | Data Source University of California, Irvine | Taxonomy ID 34508
About Steinernema carpocapsae
Steinernema carpocapsae is a parasitic nematode capable of infecting a broad range of insect species. The infective juvenile, which emerges from a depleted host cadaver to seek out a new insect to infect, is the only free-living stage. Infective juveniles tend to be found at the soil surface, and use an ambushing search strategy in which they stand on their tails and attach to a passing insect.
Genome Assembly & Annotation
Assembly
This genome represents version 1 of the S. carpocapsae assembly, as described in Dillman et al., 2015.
Annotation
These gene models represent version 1 of the S. carpocapsae annotation, as described in Dillman et al., 2015.
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Key Publications
- Dillman AR, Macchietto M, Porter CF, Rogers A, Williams B, Antoshechkin I, Lee MM, Goodwin Z, Lu X, Lewis EE, Goodrich-Blair H, Stock SP, Adams BJ, Sternberg PW, Mortazavi A. Comparative genomics of Steinernema reveals deeply conserved gene regulatory networks. Genome Biol, 2015;16():200
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Assembly Statistics
| Assembly | S_carpo_v1_submitted, Oct 2014 |
| Database Version | WBPS18 |
| Genome Size | 86,127,942 |
| Data Source | University of California, Irvine |
| Annotation Version | 2014-12-WormBase |
Gene counts
| Coding genes | 28,307 |
| Gene transcripts | 31,937 |
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This widget has been derived from the assembly-stats code developed by the Lepbase project at the University of Edinburgh
