About Meloidogyne arenaria
The peanut root knot nematode, M. arenaria , is a plant pathogenic nematode, causing significant damage to crops of peanut, vegetables, grasses, fruit ornamentals and tobacco in the Southern United States.
There are 2 alternative genome projects for Meloidogyne arenaria available in WormBase ParaSite: PRJNA340324 PRJNA438575
Genome Assembly & Annotation
Assembly
The assembly was sequenced as described in Blanc-Mathieu et al. (2017).
Annotation
The annotation was submitted directly to WormBase.
Downloads
Tools
Key Publications
- Blanc-Mathieu R, Perfus-Barbeoch L, Aury JM, Da Rocha M, Gouzy J, Sallet E, Martin-Jimenez C, Bailly-Bechet M, Castagnone-Sereno P, Flot JF, Kozlowski DK, Cazareth J, Couloux A, Da Silva C, Guy J, Kim-Jo YJ, Rancurel C, Schiex T, Abad P, Wincker P, Danchin EGJ. Hybridization and polyploidy enable genomic plasticity without sex in the most devastating plant-parasitic nematodes. PLoS Genet, 2017;13(6):e1006777
Navigation
Assembly Statistics
| Assembly | ASM90000398v1, GCA_900003985.1 |
| Database Version | WBPS18 |
| Genome Size | 258,067,405 |
| Data Source | INRA |
| Annotation Version | 2018-05-WormBase |
Gene counts
| Coding genes | 101,269 |
| Non coding genes | 1,731 |
| Small non coding genes | 1,731 |
| Gene transcripts | 103,000 |
Learn more about this widget in our help section
This widget has been derived from the assembly-stats code developed by the Lepbase project at the University of Edinburgh
